Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00606 ATGTTGGAGTTGTTGTGGTTCTTCTGGCTGTCGTGCAGAACAAGAATATCCCTGTGCAATGAAAATAATAATATACCAGATTCTTTTATTGCTGCAGTGGAGTTTGAGATTGACAGTACTTGCGAGACAGTAGCAAATGCTGGTATAGGTGAGAGTAGTAGCATAGCTGATGACAGCAGAGAAGGTGGAAGTTTTGTTGAACCAAATTACAAACAAGATGAAGGTGATAATGTTCCTCAAGATTCCTCTGGGATCACTATCCCATTTGCAATTCCCACAGTATCAGTTGTTGCGGTAGAAGAGCCGTATGTGGGTCAGGAGTTTGAGACAGAATCAGCAGCACACGCATTTTATAATGCATATGCCACAGATGTTGGATTCATCGTCCGTGTGAGTAAACTCTCTCGATCAAGGCGTGATGGAACTGCTATTGGACGTGCTCTTGTTTGCAACAAAGAAGGTTTCAGAATGCCTGACAAGCGTGAAAAGATAGTGAGGCAAAGGGCTGAGACCAGGGTTGGTTGCAGGGCAATGATAATGGTGAGGAAAGTCAGTTCTGGCAAATGGGTTGTTACAAAGCTTGTAAAGGAACATACACATCCTTTGACTCCTGGTAAAGGCAGAAGGGATTTCGTTTATGAACAATTTCCGAATGAACATGACAAAATTCGGGAACTTTCTCAGCAGTTGGCAACTGAGAAAAAGCGATCTGCAACCTATAAAAGACATCTTGAACTGATATTTGAGCATATTGAAGAGCATAACGAGAGTCTTTCAAAGAAAATACAGCACATAGTAGTGAGTGTGAGGGAGATGGAAACCAAAGAACAGAAAACTGTTCAGAATGCTGTGCTAATTCCTTCTCCTTCCAAATTCCACCTATCTGTTGTTGCAGTTCATTTAATATCTAACATGAAACAAAAACCTCACAACATAATCATTAATCAAAGAAATCAATATCCTAGAAGACGAAGCTTATTTACAGGGAATGAATGGATTCGGATTGAAAAATTGGAAGGATGTTTATATTTTCTGAAGTGA 1041 0.4015 MLELLWFFWLSCRTRISLCNENNNIPDSFIAAVEFEIDSTCETVANAGIGESSSIADDSREGGSFVEPNYKQDEGDNVPQDSSGITIPFAIPTVSVVAVEEPYVGQEFETESAAHAFYNAYATDVGFIVRVSKLSRSRRDGTAIGRALVCNKEGFRMPDKREKIVRQRAETRVGCRAMIMVRKVSSGKWVVTKLVKEHTHPLTPGKGRRDFVYEQFPNEHDKIRELSQQLATEKKRSATYKRHLELIFEHIEEHNESLSKKIQHIVVSVREMETKEQKTVQNAVLIPSPSKFHLSVVAVHLISNMKQKPHNIIINQRNQYPRRRSLFTGNEWIRIEKLEGCLYFLK 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00606 346 Pfam FAR1 DNA-binding domain 117 203 IPR004330 -
Phco9g00606 346 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 49 277 - -
Phco9g00606 346 MobiDBLite consensus disorder prediction 52 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00606 Phco-Chr9 4390102 4394644 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Phco9g00606 FAR1 3.2e-30 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01740 10 39960304 39962877 Phco9g00606 9 4390102 4394644 PCT