Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00605 ATGGCAACTTCGTTATTCCGAACCATAAGGAGAGCATCCTCTGCTCTCAGATTCTCGTACGCCACCTCGTTTTCGGTCTCTCCCAGGTCAGTTGGGAGGAGCAAGATGTGTGTGTATTCTCCTTTGAGGCATTGTGTTTCGCTAGGAGAGCAAGGTTATTGGTGGGGTTTAAGAAATTTGAGCCATGGCAGGGTGAACCTTGTGATAACGGGAGGGAAGACCAAGTTTGAGACTCATGAGGTTGAGCCTCCTAAGAAAGACAAGTGGAAGACCAAGAAGAGATTGAAGATGCAGAGGAAGAGAGAGAAGGAGAAGAGGAAAGCGGCCAACAGGAAAGACCCTCGTCGACTTGGTGTCAAAGGGAAGAAGAAGAAGCAGAGATTTGGCAGTGCAGACGAGAGAATTAAGTACAAGATTGAGAAGGCCAGAGTTAAGGAAGCATTGCTCATTGAAAGGCTCAAAAGATATGAAGTTCCTAAACTTCAGGGTCCTGTTGTGAAGCCTGATAGCTTGACGGGGGAGGAAAGGTTTTATTTGAAGAAAATGGCTCAGAAGAGATCTAATTATCTTCAAATTGGCAGAAGAGGATTATTTGGAGGGGTTGTTCTCAATATGCATATGCATTGGAAGAAACATGAGACTGTTAAGGTCATATGCAAGCCTTGTAAGCCTGGTCAAGTACACGAGTATGTGCAAGAACTTGCCAGATTGAGTGGCGGTATTCCACTTCAAATAATTGGAGATGACACTGTAATATTTTATCGTGGAAAGAACTACGAACAGCCTGATATTATGTCACCAATTGATACACTGTCCAAGAAAAAGGCACTTGAAAAATCTAAGTATGAGCAATCACTTGACTCAGTGAGGCGCTTCATTGCTATTGCTGAGAAAGAACTAGAGCTATATTACAGACACGTTGCACTTTATGGTGATCCAAACAACCGAAATCCCTTATCAGTGCTGGACAGTCCAGGTGGAAACTCTAAGGAAAAAGGGAATCATGGAATTCAAGATAAAAAATTCCCTGACTTGAACAGTGATTATTTTTCAGCTAGTCTTTCGGAGACTGAAGCAGATTCCACGGAAATGGAGCTGTCAGAAGCAGAAGATAGTTTTGAAGATGAAAGCCTGTCAATGAATGAATCAGATTCTGAAGAGAACAGCATGTCTGGTTCCAATGGTGATCAAGAAAAGGAGGTGTATTTTACTAAATTGCGATATGAAAGTGTAAGCTCGACCACTGGTTCTTCATCAATGGCTAAACGTAGCCACTATTATAATAATAATAATAATAATCAATGTTTATAA 1311 0.4172 MATSLFRTIRRASSALRFSYATSFSVSPRSVGRSKMCVYSPLRHCVSLGEQGYWWGLRNLSHGRVNLVITGGKTKFETHEVEPPKKDKWKTKKRLKMQRKREKEKRKAANRKDPRRLGVKGKKKKQRFGSADERIKYKIEKARVKEALLIERLKRYEVPKLQGPVVKPDSLTGEERFYLKKMAQKRSNYLQIGRRGLFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYVQELARLSGGIPLQIIGDDTVIFYRGKNYEQPDIMSPIDTLSKKKALEKSKYEQSLDSVRRFIAIAEKELELYYRHVALYGDPNNRNPLSVLDSPGGNSKEKGNHGIQDKKFPDLNSDYFSASLSETEADSTEMELSEAEDSFEDESLSMNESDSEENSMSGSNGDQEKEVYFTKLRYESVSSTTGSSSMAKRSHYYNNNNNNQCL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00605 436 SMART CRS1_YhbY_2 171 255 IPR001890 GO:0003723
Phco9g00605 436 ProSiteProfiles CRM domain profile. 169 266 IPR001890 GO:0003723
Phco9g00605 436 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 21 425 IPR040286 -
Phco9g00605 436 Gene3D - 170 271 IPR035920 -
Phco9g00605 436 Coils Coil 92 112 - -
Phco9g00605 436 Pfam CRS1 / YhbY (CRM) domain 171 255 IPR001890 GO:0003723
Phco9g00605 436 MobiDBLite consensus disorder prediction 315 436 - -
Phco9g00605 436 MobiDBLite consensus disorder prediction 361 382 - -
Phco9g00605 436 MobiDBLite consensus disorder prediction 79 130 - -
Phco9g00605 436 MobiDBLite consensus disorder prediction 383 398 - -
Phco9g00605 436 MobiDBLite consensus disorder prediction 407 436 - -
Phco9g00605 436 SUPERFAMILY YhbY-like 170 264 IPR035920 -
Phco9g00605 436 MobiDBLite consensus disorder prediction 89 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00605 Phco-Chr9 4386611 4390055 Dispersed/Transposed