Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00601 ATGCCCGATAATCCACCCAAAAACAGGGGCCATAGACGGGCCCATTCCGAGATTATCACCCTTCCCGATGACCTCACCTTCGACACTGATCTCGCCCTCGATGAAGACTTCCTCGCCCTCGTAGATCATCTCAATTCCCCTCCGTTGCCTGAAGATAACAACAAAAACATCGTCAACAACAACAATTGCTGCACCAACAATAACGATTACAGCGTTGGTGCTGAAAGGCCCAGGGTTAGACACCAACATAGTCATTCCATGGATTGGTCCATCCAGCCGGATATGCTGATCTCCGGCGCCGACGACGTTGCCGGCTTGGATGCCAAAAAGGCTATGTCGGCTGACAAGCTTGCTGAGCTTGCCTTAATTGATCCCAAGCGGGCTAAAAGGATATGGGCAAACCGACAGTCTGCTGCAAGATCAAAAGAAAGGAAGATGCGTTACATTTCCGAGCTTGAAAGGAAAGTGCAGACATTGCAAACAGAAGCAACATCCTTGTCTGCACAATTAACTCTCTTGCAGAGAGATACAAACGGACTGAATGCTGAGAACGGTGAGTTGAAGTTGCGGTTGCAAACCATGGAGCAACAGGTTCACTTGCAAGATGCATTAAATGATGCATTAAAAGAAGAAATTCAGCATTTGAAATTAATGACTGGACAAGCCATTCCAAATGGAGGATCTACAAACTTTGCTTCGTTTGGTGGGGGGCAACAATTCTATCCCAACAATCACGCCATGTACACTCTTTTAGCTGCACAAAAGTTTCAACAACTTCAAATTCAATCCCAGAAGCAGCAGCAGCATCAACTTCAGCAGCAACAACAACAGTTTCAGCAACATCAACTTCAGCATCAACTACAACAGCAACAGCAGAAACAAACAACCGCAACAGGTACTGTAACATCAACAAATGGGGCACTTGAATAG 930 0.4602 MPDNPPKNRGHRRAHSEIITLPDDLTFDTDLALDEDFLALVDHLNSPPLPEDNNKNIVNNNNCCTNNNDYSVGAERPRVRHQHSHSMDWSIQPDMLISGADDVAGLDAKKAMSADKLAELALIDPKRAKRIWANRQSAARSKERKMRYISELERKVQTLQTEATSLSAQLTLLQRDTNGLNAENGELKLRLQTMEQQVHLQDALNDALKEEIQHLKLMTGQAIPNGGSTNFASFGGGQQFYPNNHAMYTLLAAQKFQQLQIQSQKQQQHQLQQQQQQFQQHQLQHQLQQQQQKQTTATGTVTSTNGALE 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00601 309 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 4 297 - -
Phco9g00601 309 SUPERFAMILY Leucine zipper domain 126 177 IPR046347 GO:0003700|GO:0006355
Phco9g00601 309 Gene3D - 125 197 - -
Phco9g00601 309 Pfam bZIP transcription factor 126 180 IPR004827 GO:0003700|GO:0006355
Phco9g00601 309 SMART brlzneu 122 186 IPR004827 GO:0003700|GO:0006355
Phco9g00601 309 Coils Coil 142 211 - -
Phco9g00601 309 FunFam probable transcription factor PosF21 125 178 - -
Phco9g00601 309 CDD bZIP_plant_RF2 127 176 IPR044759 GO:0003700|GO:0006355
Phco9g00601 309 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 124 187 IPR004827 GO:0003700|GO:0006355
Phco9g00601 309 Coils Coil 261 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00601 Phco-Chr9 4359898 4363992 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco9g00601 bZIP_1 5.2e-09 CL0018