Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00580 ATGATGTCTCAGCAAAATGGGGTTCCTCCTCTAGTCACTGCACTCAAATCTTCAGCCCTAAAAAATGCTGCAAGTTTTCACTTTCCTGGACACAACAGAGGGCATGCTGCACCTGCTTCCTTGACTCAGCTCATTGGAAGAACAGCCTTTGTTCATGACTTGCCTGTGCTTCCAGAGCTTGGCAATCTCTTTTGTCCTCATGGTCCCATATTAGAAGCACAGGTTGAAGCAGCCAAACTCTTTGGATCTTCACACACATGGTTTCTTGTTGGAGGTACTACTTCTGGCATACAGGCAGCAATAATGGCCACTTGTTCTCCAGGGGAATTTCTCATTCTTCCAAGGAATTCCCATATATCAGCTATATCTGCATTGGTATTATCCGGTGCAGTGCCTAAGTACATCATTCCTCACTCTGTCAATCATTGGCACATTGCTGCTGCTGTCACTCCCTCTCAGGTATTGAAAGCCATCGAGGAACTAGAAATGGAAGGGAAAAAAGCAGCAGCAGTGTTCATCACTTCACCTACATATCATGGTATTTGCAGTAACTTGAGCAAGATTTCGGAGTTGTGTCATTCTCGAAAAATTCCTTTGATTGTTGATGAAGCTCATGGCGCACATTTTGGATTTGATTCTAAACTGCCAAAGTCAGCTCTCCAGCAAGGGGCTGATCTGATTGTGCAATCCACTCACAAGGTTTTATGCTCTCTTACTCAGTCATCTATGCTTCACATGTCAGGCAACATTGTAGATAAGGAAAAAATTTGTGGATGTCTCCGAACTCTCCAAACCACAAGCCCTAGTTTTCTGCTTTTGGCATCCCTAGATGCTGCTAGAGCTCAACTTAGTGAGAACCCTGATATTGCATTTAACCAAGCAATTGCATTAGCCGATGAGGCTAAGTGTGTGCTAAAACAAATCCCTGGTATCTCACTACTTGAGAATTCGAGCTTTCCAGCCTCTCCTGCAGTTGATCCATTGCGTCTCACTGTAGGTTTTTGGAATCTTGGTTTATCAGGTTACGAAGCAGACGAAATCTTATACAAGGATGATGAAGTCATTGGTGAACTTGTTGGTAATACATGTATTACTTATGTACTTAATCTTGGGACTTGTAGGGAGCATGTTGAGAGGCTTTTGTTGGGGATAAAGCGTTTAGCTGAAACATATGCTTCCATTCAACAACCTGAAAAGAAAGTGGTGAATGTTGATGCACCCTTTGATGATATAATCACGAGTTTGATCCCTAGAGATGCCTTTTTTGCAAGTAAAAGAAGAGTGGCAATAAGGGAGAGCATTGGTGAGGTTGCAGGGGAGCTTATATGTCCATACCCTCCAGGTGTACCAGTATTGATCCCTGGTGAGGTTATAACTCAAAAAATTGTTGATTATCTGCTTCATGTTAGGAGTAAAGGTGCTGAAATCAATGGACCATCTGACTCCTCGCTTTCTTCAATAGTTGTTTGCGGTAAATTATAA 1482 0.4258 MMSQQNGVPPLVTALKSSALKNAASFHFPGHNRGHAAPASLTQLIGRTAFVHDLPVLPELGNLFCPHGPILEAQVEAAKLFGSSHTWFLVGGTTSGIQAAIMATCSPGEFLILPRNSHISAISALVLSGAVPKYIIPHSVNHWHIAAAVTPSQVLKAIEELEMEGKKAAAVFITSPTYHGICSNLSKISELCHSRKIPLIVDEAHGAHFGFDSKLPKSALQQGADLIVQSTHKVLCSLTQSSMLHMSGNIVDKEKICGCLRTLQTTSPSFLLLASLDAARAQLSENPDIAFNQAIALADEAKCVLKQIPGISLLENSSFPASPAVDPLRLTVGFWNLGLSGYEADEILYKDDEVIGELVGNTCITYVLNLGTCREHVERLLLGIKRLAETYASIQQPEKKVVNVDAPFDDIITSLIPRDAFFASKRRVAIRESIGEVAGELICPYPPGVPVLIPGEVITQKIVDYLLHVRSKGAEINGPSDSSLSSIVVCGKL 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00580 493 Pfam Orn/Lys/Arg decarboxylase, C-terminal domain 426 473 IPR008286 GO:0003824
Phco9g00580 493 Gene3D - 393 488 - -
Phco9g00580 493 PANTHER ARGININE DECARBOXYLASE 4 490 - -
Phco9g00580 493 Pfam Orn/Lys/Arg decarboxylase, major domain 9 305 IPR000310 GO:0003824
Phco9g00580 493 Gene3D - 9 288 IPR015421 GO:0003824
Phco9g00580 493 SUPERFAMILY Ornithine decarboxylase C-terminal domain 351 491 IPR036633 GO:0003824
Phco9g00580 493 CDD Orn_deC_like 10 302 IPR000310 GO:0003824
Phco9g00580 493 SUPERFAMILY PLP-dependent transferases 9 391 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00580 Phco-Chr9 4216751 4219928 Tandem