Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00569 ATGGCTTCGCTTCTGAAAAGTCTTCGTCCTGGTGTGCCTTCAGTTCATGATGCTGGAGGTGATTTCAGCTATGAGTACTCTTTTGCTGAGGAATACAAAGGTCCTCCTCTCAGCTACTCTATCCCAGAAGTTCTTTCTTTCGACCTTGACCAAATCCCACTTGCAACTGTTGCTCATTCTCCCCCTCACAACTTGTCCCTTCCAGTTATCCAACCCTTTAGAAAAACCAATGCAGAATTGGCTACAAGAGCTGCTTCTGTTTCTTCTAATCCACTGTCATGCAAAGAAGAGGATCATGATGATGATGATGAGGAGGAGCCTGTTAGCCCAAAACATGTTAAACGGCCCTCCGTGGTGACTTTTCGTGATCCTGAGACAAATGAGATAGTGGATGATGAAGAGATTGTTGAATCTGTTGGTGGAGAAAGTAATAGCAACAATAGTAATAGGAATAATAATCGTGTGAGGCCGCATGCTGAGAGAGGTGGGAAGAAGGGTTCGTGTTATCGATGCCTTAAAGGGAGTCGTCTAACTGAGAGGGAGGTTTGCATTGTTTGCGGTGCAAAGTTTTGTCGCAACTGCGTACTTAGAGTAATGGGGTCCATGTCTGAAGGCAGAAAATGTGTCACTTGCATCGGTTATAGAATTGATGAGGACAAGCGAGGGAAGCTTGGAAAACCTTCTCGGATGCTCAAGTACTTGTTGTCTAAGGAGGAAGTGAAACAAATCATGAAGGATGAGATGTTTTGTAAAACAAATCAGATACCAGCAGAAGATGTTCGTGTGAATGGAGAACCTCTTGACTTGGATCAGCTCACGCTGCTTTTGACCTGTTCAAACCCCCCAAAAGGATTGAAACCGGGTTTCTATTGGTATGATAAAGCATCTGGGTTTTGGGGAAAGGAAGGTCAACGGCCATGTCAAATTATTAGCCCACAGTTAGAGGTTGGGGGTCACTTGCAGAGAAATGCAAGCAATGGAAAGACAGAAGTAACTATAAATGGTCGAGAGATTACCAAAAAAGAGCTATGGATACTGAAGTGGGCAAGAGTGCCATGTGAGGGAACAACTGACTTTTGGGTGAGCCAAGATGGATCGTACATGGAAGTGGGACAGAAGAATGTCAAGGGGCACATATGGGAGAAGTCTACAGTGAAGCTTGCTTCTCTAATTCTGTCCCTGCCAGTTCCTTCTAGCTCCTTAACTCCAGCCGACGAAGGAGAAAATGGAATTAGCAAACACAACATTCAACAGAAAATGCTTCACAAATTTTTACTTGTTGGTTCTGTAAATTCTGGAACATGTACCATATATAAACAGGCCAAGCTTCTGTATAATGTTCCTTTCTCTGTAACCGAGCTCCAAAACATCAAGCTGGTAATTCAAAGAAACTTGTATAGGTACCTTGGCATCATATTAGAGGCACGAGAATTTTTTGAAGAGAGTCTGTTTGAAAAAAGTAACGAACAACATGTTGGTGAATCAACTTCTTCGGGGATTACTGGAGAAATTATTGACTCGACAACCTATTCTATTAGTCCAAGACTAAGAACTTTCTCCGATTGGCTACTCAAATACATGATGTCAGGCAACTTGGATGCAATATTTCCAGCTGCTGCTCGTGAATATGCGCCACTGGTGGAGGAACTGTGGAGGGATGCAGCCATTCAGGCCACATACAAAAGGAGAAATGAAATAAAAAATCTGCCAAAAAGTGCGAGCTATTTTCTTGAGCGGGCTGATGAAATTTCCAGCATAGGTTATGAACCCTTGGACATGGACATCTTGTATGCTGAGGGAATAACCTTATCAAATTGCCTTTCTTCTATGGAATTTTTATTTCCTGTGTCAGGTCGTGAGGACTCATTGGACCCTGTGTATCAACATGATCCTTCACTCAGGTACCAGCTCATCAGAGTGCATCCAAAAAGCCTCGGAGAAAACTACAAGTGGTTGGATATGTTTGAAGACACTGATGTAGTCTTATTCTCAGTGGCCTTAACTGACTATGATGAGTACACGGTAGACAGTAATGGAGTTGCTACCAACAAAATTTTAGCAGCCAAACATCTCTTTCAAAATATCATCACTCATAGAGTCTTCCGCAACACGAAATTTCTTCTAATATTGACCAAGTTTGATCTGTTTGAGGAAAAGATTGAACAGGTTCCTCTAACACAATGTGAATGGTTTTGGGACTTCAATCCAGTTATCAGCCACAACCATCAAACCGCTAGTATTGGTAAACGTACCAACCATCCTCCACTGGCTCAACGTGCTTTCCAATACATTGGTATGAAGTTCAAGAGCTGGTTCAATTCTCTAACTGGTAGAAAGCTGTTTGTTTCACTGGTTACTGGGTTGGAACCTGCTACTGTTGATGAAGCTCTTAGATATGGCAGAGAGGTTATGGTGTGGGAAAAATGGGATCCCTCTTTGATAAATGAGAAGTTTGAGATAACATCCACAACTTTTGATGCAAGCTCTGAATAA 2493 0.4236 MASLLKSLRPGVPSVHDAGGDFSYEYSFAEEYKGPPLSYSIPEVLSFDLDQIPLATVAHSPPHNLSLPVIQPFRKTNAELATRAASVSSNPLSCKEEDHDDDDEEEPVSPKHVKRPSVVTFRDPETNEIVDDEEIVESVGGESNSNNSNRNNNRVRPHAERGGKKGSCYRCLKGSRLTEREVCIVCGAKFCRNCVLRVMGSMSEGRKCVTCIGYRIDEDKRGKLGKPSRMLKYLLSKEEVKQIMKDEMFCKTNQIPAEDVRVNGEPLDLDQLTLLLTCSNPPKGLKPGFYWYDKASGFWGKEGQRPCQIISPQLEVGGHLQRNASNGKTEVTINGREITKKELWILKWARVPCEGTTDFWVSQDGSYMEVGQKNVKGHIWEKSTVKLASLILSLPVPSSSLTPADEGENGISKHNIQQKMLHKFLLVGSVNSGTCTIYKQAKLLYNVPFSVTELQNIKLVIQRNLYRYLGIILEAREFFEESLFEKSNEQHVGESTSSGITGEIIDSTTYSISPRLRTFSDWLLKYMMSGNLDAIFPAAAREYAPLVEELWRDAAIQATYKRRNEIKNLPKSASYFLERADEISSIGYEPLDMDILYAEGITLSNCLSSMEFLFPVSGREDSLDPVYQHDPSLRYQLIRVHPKSLGENYKWLDMFEDTDVVLFSVALTDYDEYTVDSNGVATNKILAAKHLFQNIITHRVFRNTKFLLILTKFDLFEEKIEQVPLTQCEWFWDFNPVISHNHQTASIGKRTNHPPLAQRAFQYIGMKFKSWFNSLTGRKLFVSLVTGLEPATVDEALRYGREVMVWEKWDPSLINEKFEITSTTFDASSE 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00569 830 Gene3D - 452 596 IPR011025 GO:0007165
Phco9g00569 830 ProSiteProfiles G-alpha domain profile. 420 821 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Phco9g00569 830 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 199 808 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Phco9g00569 830 Gene3D - 597 812 IPR027417 -
Phco9g00569 830 Pfam G-protein alpha subunit 413 798 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Phco9g00569 830 FunFam Guanine nucleotide-binding protein subunit alpha 630 747 - -
Phco9g00569 830 MobiDBLite consensus disorder prediction 129 165 - -
Phco9g00569 830 FunFam Extra-large guanine nucleotide-binding protein 2 456 601 - -
Phco9g00569 830 SMART galpha_1 408 788 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Phco9g00569 830 MobiDBLite consensus disorder prediction 81 113 - -
Phco9g00569 830 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 419 798 IPR027417 -
Phco9g00569 830 SUPERFAMILY FYVE/PHD zinc finger 150 212 IPR011011 -
Phco9g00569 830 MobiDBLite consensus disorder prediction 139 153 - -
Phco9g00569 830 SUPERFAMILY Transducin (alpha subunit), insertion domain 449 598 IPR011025 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00569 Phco-Chr9 4110283 4114108 Dispersed/Wgd