Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00532 ATGATGAGTGAAGCAAAGGTAGTAGAAAGTGAAGAAGCTCATCGAACTCCAAAGAACCTCAAACTCAACAACTACACTTTTGCCTGTGCTATCTTGGCCTCTATCACTTCAATCTTGCTTGGCTATGATATTGGTGTGATGAGTGGAGCAGCCATATACATTAAAAGAGATCTAAAATTGTCCGATGTGAAAATCGAGATCCTCGTCGGAATCTTCAACCTCTACTCTTTGGTAGGGTCGTGCCTCGCCGGAAGAACCTCTGACTGGATAGGTCGTCGGTACACTATTGTTTTTGCCGGCGCCATTTTCTTCGTTGGAGCCATTCTCATGGGCTTTTCTCCCAACTATGCCTTTCTCATGTTCGGTCGTTTTGTTGCCGGCGTCGGCATGGGCTACGCTCTCATGATTGCTCCCGTTTACACAGCCGAACTCTCCCCACCCTCCTCTCGTGGCTTCCTCACTTCCTTCACTGATGTGTTTATCAATGTAGGGATATTACTTGGATATATATCAAACTATGCATTATCAAAGATGACGCTGAAGTTAGGTTGGCGAATGATGCTTGGAATCGGTGCAATTCCATCGATGTTTTTAACGGTGGGTGTGTTGGCGATGCCTGAATCTCCACGGTGGCTTGTGATGAGGGGTCGTTTGGGAGAGGCAAAGAAAGTGCTCAACAAAACCTCGGACACCAAGGAAGAGGCTCAACAGAGACTAGCTGAGATCAAAGAAGCCGCTGGAATCCCTGAGAACGAAGAAGGCGAGGTGGTTGAGGTGAGCAAGCGAAACAGAGGTGAAGGTGTATGGAAAGAGTTGTTCCTTGATTCAACGCCTGCAATACGTCACATGTTAATGGCTACCCTTGGGATTCACTTCTTTCAACAAGCATCTGGCGTAGACGCTGTGGTTTTGTACAGCCCCACGATCTTCGAAAAGGCTGGGATCACCATTGACACATACAAGCTTCTTGCAACTGTGGGTGTTGGATTTGTTAAGACCATGTTCATCTTGGTTGCTACCTTCATGCTGGACCGTGTGGGGCGTCGTCCATTGCTACTGTCGAGTTTTGGAGGCATGCTGCTCTCGCTTCTCACACTTGCTATCTCTCTCACTGTGATTCATCAGTCCCAGAAAAAGCCAATATGGCTGGTTGGATTGAGCATGGTGATGGTGTTATCCTATGTAGCTTCCTTCTCCATTGGTGCAGGACCCGTGACGTGGGTGTACAGCTCTGAAATATTTCCCTTGAGGTTGCGGGCACAAGGTATGGCTGTGGGAGTTGTGGTGAATAGAACTACAAGTGGGGTTCTCTCCATCACTTTTTTGTCCTTATCTAAAGCAATTACTATTGGTGGAGCTTTCTTTCTTTATTCTGCCATTGCTGCTTTTGGTTGGGTCTTCATTTACACCATACTACCTGAAACACGAGGTAAAACACTTGAAGAAATGGTTACGTCTTTTGGTAAATTTTGGGTCAAATCCAGCACAACCAAACCAGTAAACAACAGTCATTCTCAAATGCCCCAACTCCAGCAAGGGACCATTAATGTCCAAAATTAG 1560 0.4635 MMSEAKVVESEEAHRTPKNLKLNNYTFACAILASITSILLGYDIGVMSGAAIYIKRDLKLSDVKIEILVGIFNLYSLVGSCLAGRTSDWIGRRYTIVFAGAIFFVGAILMGFSPNYAFLMFGRFVAGVGMGYALMIAPVYTAELSPPSSRGFLTSFTDVFINVGILLGYISNYALSKMTLKLGWRMMLGIGAIPSMFLTVGVLAMPESPRWLVMRGRLGEAKKVLNKTSDTKEEAQQRLAEIKEAAGIPENEEGEVVEVSKRNRGEGVWKELFLDSTPAIRHMLMATLGIHFFQQASGVDAVVLYSPTIFEKAGITIDTYKLLATVGVGFVKTMFILVATFMLDRVGRRPLLLSSFGGMLLSLLTLAISLTVIHQSQKKPIWLVGLSMVMVLSYVASFSIGAGPVTWVYSSEIFPLRLRAQGMAVGVVVNRTTSGVLSITFLSLSKAITIGGAFFLYSAIAAFGWVFIYTILPETRGKTLEEMVTSFGKFWVKSSTTKPVNNSHSQMPQLQQGTINVQN 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00532 519 PRINTS Sugar transporter signature 411 423 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00532 519 PRINTS Sugar transporter signature 120 139 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00532 519 PRINTS Sugar transporter signature 388 409 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00532 519 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00532 519 PRINTS Sugar transporter signature 294 304 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00532 519 Pfam Sugar (and other) transporter 29 485 IPR005828 GO:0016020|GO:0022857|GO:0055085
Phco9g00532 519 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 476 IPR020846 GO:0022857
Phco9g00532 519 FunFam probable polyol transporter 4 19 490 - -
Phco9g00532 519 CDD MFS_PLT 32 483 IPR044776 GO:0005351
Phco9g00532 519 ProSitePatterns Sugar transport proteins signature 2. 125 150 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phco9g00532 519 NCBIfam sugar porter family MFS transporter 2 483 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00532 519 ProSitePatterns Sugar transport proteins signature 1. 83 100 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phco9g00532 519 Coils Coil 218 245 - -
Phco9g00532 519 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 19 489 IPR045262 GO:0015144
Phco9g00532 519 Gene3D MFS general substrate transporter like domains 19 489 IPR036259 -
Phco9g00532 519 SUPERFAMILY MFS general substrate transporter 12 482 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00532 Phco-Chr9 3885965 3887696 Tandem