Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00531 ATGACTGAGGGAAAGGGAGTTGAAACTCGGAAAATAGTTGGGGATTTCAATTCTTCCAAGAAGCCCAAAAGAAACAAGTATGCTTTTGGTTGCGCTATATTGGCCTCCATGACATCCATTTTACTTGGCTATGATATTGGGGTGATGAGTGGTGCAGCCATATACATAAAGAGGGACCTAAAGGTGTCGGACGTGCAAATAGAGATACTGATGGGAATCATCAACCTGTACTCTCTCATAGGCTCATGCTTGGCCGGCAGAACCTCCGACTGGATAGGGCGGCGATACACCATTGTGTTCGCCGGAACCATCTTCTTCGCCGGAGCACTTCTGATGGGCTTCTCCCCCAACTATTCCTTTCTGATGTTCGGGCGTTTCGTGGCGGGCATCGGAATCGGCTATGCCCTCATGATCGCTCCTGTCTACACCGCCGAAGTCTCCCCAGCCTCCTCCCGTGGCTTCCTCACTTCCTTTCCCGAGGTTTTTATTAATGGCGGGATATTACTGGGATACGTGTCCAATTATGCCTTTTCAAAGATGACATTGAAGTTAGGATGGCGAATGATGCTTGGAATCGGTGCAGTTCCCTCGGTGCTCCTGACAGTGGGAGTGTTGGCGATGCCTGAATCTCCGCGGTGGCTGGTGATGAGGGGACGTTTGGGAGAGGCGACGAAAGTGCTTAATAAAACCTCCGACAGCATGGAAGAAGCTCAACTGAGGCTAGCCGATATCAAACAAGCCGCAGGGATCCCAGAGAGTTGCAACGACGACATCGTTCAGGTAACCAAACAAAGCACGGGTGAGGGCGTTTGGAAAGAGTTGTTCCTCTATCCAACGCCTACGATTCGTCACATCTTAATTGCGGCCATTGGAATTCACTTCTTCCAACAAGCGTCGGGTGTGGACGCTGTGGTTTTATACAGCCCCAGAATCTTCGAGAAGGCTGGGATCACCGATGACACGCATAAGCTTCTTGCAACCGTGGCCGTTGGAACGGTGAAGACCTTGTTCATCTTGGTTGCTACTTTTATGTTGGATCGCGTGGGTCGTCGACCCTTGTTATTGTCTAGTGTTGGAGGCATGGTGCTCTCGCTTCTCACACTCGCAATCAGTCTTACAATCATTGATCATTCGGAGAGTAAGCTAATGTGGGCCATTGGATTGAGTATATCAATGGTGTTAGTCTACGTGGCCACGTTTTCCATCGGTGCGGGACCCATCACGTGGGTCTACAGCTCTGAGATATTTCCGTTGAGGTTGCGGGCGCAGGGTGCAGCTGCGGGTGTTGTGGTGAACAGAACCACAAGTGGGGTTATTTCAATGACTTTTTTGTCCCTCACTAACGCCATCACCATTGGTGGAGCTTTCTTCCTCTATTGTGGGATTGCTACGGTTGGGTGGTTATTCTTCTACATTGTGCTTCCTGAGACGCGAGGTAAAACACTTGAAGACATGGAGGGGTCTTTCGGTACTTTCACAGCCAAATCCAACACCAACAATGGAGTTGAAAATGGAATTGCCAAAGTTCCACAAGTTTAG 1539 0.4964 MTEGKGVETRKIVGDFNSSKKPKRNKYAFGCAILASMTSILLGYDIGVMSGAAIYIKRDLKVSDVQIEILMGIINLYSLIGSCLAGRTSDWIGRRYTIVFAGTIFFAGALLMGFSPNYSFLMFGRFVAGIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYVSNYAFSKMTLKLGWRMMLGIGAVPSVLLTVGVLAMPESPRWLVMRGRLGEATKVLNKTSDSMEEAQLRLADIKQAAGIPESCNDDIVQVTKQSTGEGVWKELFLYPTPTIRHILIAAIGIHFFQQASGVDAVVLYSPRIFEKAGITDDTHKLLATVAVGTVKTLFILVATFMLDRVGRRPLLLSSVGGMVLSLLTLAISLTIIDHSESKLMWAIGLSISMVLVYVATFSIGAGPITWVYSSEIFPLRLRAQGAAAGVVVNRTTSGVISMTFLSLTNAITIGGAFFLYCGIATVGWLFFYIVLPETRGKTLEDMEGSFGTFTAKSNTNNGVENGIAKVPQV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00531 512 PRINTS Sugar transporter signature 122 141 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00531 512 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00531 512 PRINTS Sugar transporter signature 39 49 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00531 512 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00531 512 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00531 512 FunFam probable polyol transporter 4 21 492 - -
Phco9g00531 512 CDD MFS_PLT 34 485 IPR044776 GO:0005351
Phco9g00531 512 Gene3D MFS general substrate transporter like domains 21 491 IPR036259 -
Phco9g00531 512 Pfam Sugar (and other) transporter 31 487 IPR005828 GO:0016020|GO:0022857|GO:0055085
Phco9g00531 512 ProSiteProfiles Major facilitator superfamily (MFS) profile. 31 478 IPR020846 GO:0022857
Phco9g00531 512 NCBIfam sugar porter family MFS transporter 25 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00531 512 ProSitePatterns Sugar transport proteins signature 1. 85 102 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phco9g00531 512 ProSitePatterns Sugar transport proteins signature 2. 127 152 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phco9g00531 512 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 26 489 IPR045262 GO:0015144
Phco9g00531 512 SUPERFAMILY MFS general substrate transporter 20 486 IPR036259 -
Phco9g00531 512 Coils Coil 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00531 Phco-Chr9 3862637 3864636 Dispersed/Tandem