Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00530 ATGACTGAGGGAAAGGTAGTTGAAACTGATAAAACACTTGATGATTTCGATCCTCCCAAGAAGCCCAAAACCAACAAGTATGCTTTTGGTTGCGCTATATTGGCCTCCACTACATGCATTTTACTTGGTTATGTTACAATGGAAGTTGTTATTGTTATAGATATTGGGGTGATGACCGGTGCAGCCATATACATAAAGAGGGACCTAAAGGTGTCGGACGTGCAAATAGAGATACTGTTAGGAATCATCAACCTGTACTCTCTCATAGGCTCATGCTTGGCCGGCAGAACCTCCGACTGGCTAGGGCAGCGATACACCATTGTCTTCGCCGGAGCACTTCTGATGGGCTTCTCCCCCAACTATTCTTTTCTGATGTTCGGGCGTTTCGTGGCGGGCATTGGCATCGGCTATGCCCTCATGATCGGCCCTATCTACTCCGCCGAGGTTTTTATTAACGGAGGGATATTACTTGGATACATATCCAACTACGCATTTTCAAAGATGACATTGAAGTTGGGATGGCGAATGATGCTTGGAATCGGTGCAATTCCTTCGATACTCTTAACAGTGGGAGTGTTGGTGATGCCGGAATCTCCGCGGTGGCTGGTGATGAAGGGACGTTTGGGAGAGGCAAGAAAAGTGCTTAACAAAACCTCTGACAGTAAGGAAGAAGCTCAACTAAGGCTAGCCGATATCAAACAAGCCGCAGGGATCCCAGAGAGTTGCAACGACGACGTCGTTCAGGTAACCAAACAAAGTTCTGGCAACAACGTATGGAAAGAGTTGTTCCTTTATCCAACGCCTGCGATTCGTCACATCTTAATTGCAGCCCTCGGGATTTACTGCTTCCAACAAGCGTCGGGCGTGGACGCCGTCGTTTTATACAGCCCCAGAATCTTCGAGAAGGCTGGGATGACCGATGACACACATAAGCTTTTTGCAACTGTGGCCGTTGGATTCGTGAAGACCATGTTCATCTTGGTTGCTACTTTTATGTTGGACCGCGTGGGTCGTCGTCCCATGTTATTGTCTAGTGTTGGAGGCATGGTGGTCTCGCTTCTCACACTCGGAATCGCCTTTACCATCATTGATCACTCGGAGAGTAAACCGATGTGGGCCATTGGATTGAGCATAACGATGGTGTCAGCCTTCGTGGCGACGTTTTCCATCGGTGCGGGACCCATCACGTGGGTTTAG 1197 0.4845 MTEGKVVETDKTLDDFDPPKKPKTNKYAFGCAILASTTCILLGYVTMEVVIVIDIGVMTGAAIYIKRDLKVSDVQIEILLGIINLYSLIGSCLAGRTSDWLGQRYTIVFAGALLMGFSPNYSFLMFGRFVAGIGIGYALMIGPIYSAEVFINGGILLGYISNYAFSKMTLKLGWRMMLGIGAIPSILLTVGVLVMPESPRWLVMKGRLGEARKVLNKTSDSKEEAQLRLADIKQAAGIPESCNDDVVQVTKQSSGNNVWKELFLYPTPAIRHILIAALGIYCFQQASGVDAVVLYSPRIFEKAGMTDDTHKLFATVAVGFVKTMFILVATFMLDRVGRRPMLLSSVGGMVVSLLTLGIAFTIIDHSESKPMWAIGLSITMVSAFVATFSIGAGPITWV 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00530 398 SUPERFAMILY MFS general substrate transporter 39 387 IPR036259 -
Phco9g00530 398 ProSiteProfiles Major facilitator superfamily (MFS) profile. 40 398 IPR020846 GO:0022857
Phco9g00530 398 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 24 398 IPR045262 GO:0015144
Phco9g00530 398 Gene3D MFS general substrate transporter like domains 23 398 IPR036259 -
Phco9g00530 398 Pfam Sugar (and other) transporter 33 398 IPR005828 GO:0016020|GO:0022857|GO:0055085
Phco9g00530 398 Coils Coil 215 235 - -
Phco9g00530 398 PRINTS Sugar transporter signature 125 144 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00530 398 PRINTS Sugar transporter signature 284 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00530 398 PRINTS Sugar transporter signature 378 398 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00530 Phco-Chr9 3847108 3848562 Wgd