Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00514 ATGACGGAGGCCAACACAACCACGAGTGTCAGTTTGAAGCTTCTCGTGTTGGTGGCTGTTTTGGTGGTCTTCGCGGTGGTGATTGTAGTTCTCGTCTTCTTCCTGTGCTTGCGGGGGAGCCGGAGCTGGAAGCGGCGGAAGCTGGCGGCGAAACACAGCTCCGGGAGCATCCCTCTGGTGTCGAAGGAGATCATGGTGGTGAAGACCTCGGATCTCACCCCTGCGACGACCAGCGAGATTGGTGACGTGGAGGGTGATCCGAAGAAGGAGGTGGGGATGAAGGTAGAGATTGGAGCGGTGACAGCAGTGATGAAGAGCGAAGTTTCCGGTGGTGGGGCCCACCGCAGCGAGGTGTCGGTGGAGGATCCGAACATAGGGTGGGGCCGGTGGTACAGCATGAAGGAAGTGGAACTCGCCACGCGCGGTTTCGCAGAAGGGAATGTTATTGGAGAAGGTGGGTACGGCGTTGTGTACAGAGGAATTATGCACGATGCTTCCGTCGTTGCTGTTAAGAATCTTCTCAACAACAAGGGTCAAGCAGAGAAGGAGTTTAAGGTAGAGGTTGAAGCTATTGGAAAAGTAAGGCACAAGAATTTGGTTCGTTTGGTAGGATATTGTGCAGAAGGTGCTCGAAGGATGCTAGTTTATGAGTATGTTGACAACGGAAACTTGGAACAGTGGCTGCATGGTGATGTAGGACCAGTTAGCCCTTTGACATGGGAGATTCGAATGAGAATTGCTATTGGGACAGCAAAAGGGCTAGCCTATTTGCATGAAGGCTTAGAACCCAAAGTTGTGCACCGGGATGTAAAATCCAGTAACATTCTCTTGGATAAAAACTGGAATGCCAAAGTATCAGATTTTGGACTTGCCAAACTCTTAGGATCAGAGAAAACCCATGTGACTACGCGTGTGATGGGAACATTCGGATATGTTGCACCTGAGTATGCAAGCTCTGGCATGCTTAATGAGCGCAGTGATGTGTATAGCTTTGGAGTTCTACTCATGGAGATAATCACAGGAAGAAGCCCCATTGATTATTCAAAACCACCTGGAGAGATGAATTTAGTAGATTGGTTCAAGGCAATGGTAGCAAGTCGTCGCAGTGAGGAGCTAGTTGATCCTTTGATTGAGATTCCACCCTCTCCAAGATCTTTGAAACGAGTTTTACTTATTTGTCTGCGGTGTATAGACTTGGATGTGGTTAAGCGACCAAAGATGGGTCAAATTGTTCATATGCTTGAGACAGATGATTTCCCCTTTCGTTCTGAGCTACGTACAGTTAGAGAGAAAGATCCTTTGCCTTCTCATGCAGATGTTTCCATTAAAGTTCCTTATCCACCACCAAAGCATGCAGAAACCGTAGAAAAATCAAGATGGAGATGA 1386 0.482 MTEANTTTSVSLKLLVLVAVLVVFAVVIVVLVFFLCLRGSRSWKRRKLAAKHSSGSIPLVSKEIMVVKTSDLTPATTSEIGDVEGDPKKEVGMKVEIGAVTAVMKSEVSGGGAHRSEVSVEDPNIGWGRWYSMKEVELATRGFAEGNVIGEGGYGVVYRGIMHDASVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVRLVGYCAEGARRMLVYEYVDNGNLEQWLHGDVGPVSPLTWEIRMRIAIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKNWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVAPEYASSGMLNERSDVYSFGVLLMEIITGRSPIDYSKPPGEMNLVDWFKAMVASRRSEELVDPLIEIPPSPRSLKRVLLICLRCIDLDVVKRPKMGQIVHMLETDDFPFRSELRTVREKDPLPSHADVSIKVPYPPPKHAETVEKSRWR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00514 461 CDD STKc_IRAK 149 415 - -
Phco9g00514 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Phco9g00514 461 SUPERFAMILY Protein kinase-like (PK-like) 121 416 IPR011009 -
Phco9g00514 461 FunFam Putative receptor-like serine/threonine-protein kinase 219 429 - -
Phco9g00514 461 SMART serkin_6 143 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00514 461 FunFam Probable serine/threonine-protein kinase At1g01540 123 218 - -
Phco9g00514 461 MobiDBLite consensus disorder prediction 436 461 - -
Phco9g00514 461 ProSitePatterns Protein kinases ATP-binding region signature. 149 171 IPR017441 GO:0005524
Phco9g00514 461 Gene3D Transferase(Phosphotransferase) domain 1 219 425 - -
Phco9g00514 461 PANTHER OS01G0323000 PROTEIN 5 431 - -
Phco9g00514 461 Gene3D Phosphorylase Kinase; domain 1 113 218 - -
Phco9g00514 461 Pfam Protein tyrosine and serine/threonine kinase 146 414 IPR001245 GO:0004672|GO:0006468
Phco9g00514 461 ProSiteProfiles Protein kinase domain profile. 143 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00514 Phco-Chr9 3736000 3739058 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Phco9g00514 PK_Tyr_Ser-Thr 1.6e-47 CL0016