Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00509 ATGTTTATTTCCTCCGTTCCACTGCACAATCCAATAACAACATGCACCATTTTCAATTGCCAAAACCCAAACCAGCATCACTCCATTCTCCGCAAGCACAATTCCAAATCCACCGCGTATCTCCTTCAGCATCTCGCCCTCAAGGATGGAGTACCCATTCCCACTTCCATTCCCAAACCCAGCGAGCTTCTAGACCCAATGCCCCACGATGAGAAAGTGAAGGTTTTGGAGCTTTCCCTCGTCAGGAAAAGGACCCCTCAGTTTCCTGGTTCCATCTACGCTCAGTCTCCCAGCGACTCCGATGTGGGTTCTTCTCTGCCCCCTATCCGTACTCTCTTTCAATCAGGTGCTAACCCTGATGATAAAGATGAGAAGGAAGCGGAGGAGGAGGAGATGATAATGCGCGCTCTCGAGATTCGCAGAAAGGTCACTGAAGAGGTTTTCAAAGAAGCCATGCGAAAGGGAAAGTTTGGAATTACCTACTCTACCAATTTGATTGGCAGGTTATCCGGCTTTCTGGATCACGTCATGATTGAAGCTGCTAACTTGAAAAGATTGCCCGGATTTTCAAACTCCACCTTCAATTTACGCGCCAAAACTGTCATTGATGACTCTAAAGTTGTGCCACTTATTAGATGGTTGAAGCATAATGCACTGTCGTATCCTCGGATAGCGAAGATCATTTTGATGTCAAGAGGAAAACCCGAGGCCATAAGAAGTTTCGTCATGTGGTTGAAATCGGTACGTGTGAAAGGTGAGTTTCTCGGTGTTGTAATGTTGAAGGCTGGAGAGAATATTTTGCAGCGCAGACATGAGGAGCTGGATGAGATTGTTCAGTATTTGGAGTCCAATGGAGTAAGGAGGGATTGGATGGGTTATGTCATTAGTCGTTGTCCTCAGCTATTGTCTTACAGCTTAGAAGAAGTGAAGACTCGTGCACATTTCTTCATAGATATGGGTTTAAATGAGAAAGATTTTGGTACAATGGTTTTCGATTTTCCTAGAGTTCTTGGTTACTATTCTCTGGAAGAAATGAATGAAAAGGTTAATTACTTAAAAGAATTTGGGCTTCAAATTGAGGATGTTGGCAAATTGCTTGCATTTAGGCCACAATTGATGGCATGCAGCATTGAGGAACACTGGAAGCCTCTTGTTAAGTATCTGTATTATTATGGGATCACTCGAAATGGCATGAAGAGAATGCTTGTCATTAAACCAATGGTCTTTTGTGCTGACTTGGAAAAGACTATTGTGCCAAAGGTACAATTTTTTGAAGATATAGGGGTTCGCAATGATGGGATTGGCAGCATGCTTGTGAAGTTTCCACCTCTACTCACTTACAGCCTGGATAAGAAAATTAAACCAGTGGTTATATTCTTGATGACCAAAGCTGGAGTCAGTGAGAAAGATATTGGCAAGGTTGTGGCTCTTGGACCTGAGCTCTTGGGATGCAATATAGTACATAAGCTTTATGTAAATGTAAAATATTTTTTATCTCTTGGCATACGTCTTCGGCAATTGGGTGAGATGATTACTGATTTCCCATTGCTGCTCAGATACAATCCAGATGTCCTTCGTCCCAAGTATATTTATTTGCGAAAGTCCATGGTCCGGCCTTTGAAAGATGTCATTGAGTTTCCAAGGTTTTTCAGCTATTCTCTTGAGGGCCGAATTATCCCAAGGCACAAGGTTCTAGTGGAGAACCATATTAATATGAAGCTGAGATACATGTTGGCTAACAGTGACGAAGAATTCCACAAAATGGTCAAGGATTTAATTGGAAAGCGCAGAAGATTTGAATCTGCTGTCACAAATGAGGGCACTACCCATCTCCAATCTGTTGTTACTGAAGATATTTCAACACCCCTGGCATAA 1875 0.4261 MFISSVPLHNPITTCTIFNCQNPNQHHSILRKHNSKSTAYLLQHLALKDGVPIPTSIPKPSELLDPMPHDEKVKVLELSLVRKRTPQFPGSIYAQSPSDSDVGSSLPPIRTLFQSGANPDDKDEKEAEEEEMIMRALEIRRKVTEEVFKEAMRKGKFGITYSTNLIGRLSGFLDHVMIEAANLKRLPGFSNSTFNLRAKTVIDDSKVVPLIRWLKHNALSYPRIAKIILMSRGKPEAIRSFVMWLKSVRVKGEFLGVVMLKAGENILQRRHEELDEIVQYLESNGVRRDWMGYVISRCPQLLSYSLEEVKTRAHFFIDMGLNEKDFGTMVFDFPRVLGYYSLEEMNEKVNYLKEFGLQIEDVGKLLAFRPQLMACSIEEHWKPLVKYLYYYGITRNGMKRMLVIKPMVFCADLEKTIVPKVQFFEDIGVRNDGIGSMLVKFPPLLTYSLDKKIKPVVIFLMTKAGVSEKDIGKVVALGPELLGCNIVHKLYVNVKYFLSLGIRLRQLGEMITDFPLLLRYNPDVLRPKYIYLRKSMVRPLKDVIEFPRFFSYSLEGRIIPRHKVLVENHINMKLRYMLANSDEEFHKMVKDLIGKRRRFESAVTNEGTTHLQSVVTEDISTPLA 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00509 624 MobiDBLite consensus disorder prediction 90 126 - -
Phco9g00509 624 Pfam mTERF 223 354 IPR003690 GO:0003690|GO:0006355
Phco9g00509 624 Pfam mTERF 345 585 IPR003690 GO:0003690|GO:0006355
Phco9g00509 624 Gene3D Transcription termination factor 3, mitochondrial 368 592 IPR038538 -
Phco9g00509 624 PANTHER CGI-12 PROTEIN-RELATED 265 364 IPR003690 GO:0003690|GO:0006355
Phco9g00509 624 MobiDBLite consensus disorder prediction 90 112 - -
Phco9g00509 624 SMART mt_12 363 394 IPR003690 GO:0003690|GO:0006355
Phco9g00509 624 SMART mt_12 508 539 IPR003690 GO:0003690|GO:0006355
Phco9g00509 624 SMART mt_12 472 503 IPR003690 GO:0003690|GO:0006355
Phco9g00509 624 SMART mt_12 292 322 IPR003690 GO:0003690|GO:0006355
Phco9g00509 624 SMART mt_12 540 571 IPR003690 GO:0003690|GO:0006355
Phco9g00509 624 SMART mt_12 399 430 IPR003690 GO:0003690|GO:0006355
Phco9g00509 624 SMART mt_12 435 467 IPR003690 GO:0003690|GO:0006355
Phco9g00509 624 SMART mt_12 327 358 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phco9g00509 mTERF 2.8e-51 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00509 9 3707074 3710408 Phco9g00509 9 3707074 3710408 ECH