Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00488 ATGATGACTCCCAAATTTCAAAACGTAGTCTCCACGGCGGCGTCCGTGGCGGCCACCGTGATGCTCCTCCGCTCGTTCACCCGCAACTACATTCCCCCGGAGCTCCAGCACTACCTTTACTCCAAACTCTCCAAATTCCTCTCCTTCTCCTCCGAACTCACCCTCGTCATCGACCAGTTCCACGGGTTCACTCTGAACCCGCTCTTCGCCGCGGCGCAGCTCTACCTCAAGCCGCACGAGGCGCCGAACGCGAAACGCTTCCGCGCCACGATGCCTTCGAAATCGCGCCACGTGTCCCTCCTGATGGACGGCAACGACGACATCACGGACTCCTTCAACGGCGTGCCGTTCCGGTGGAAGCTCGTGTCCCGACGCGACAAATCGAATTCCCTGGTGCACTTCTTCGAGGTGCGGTTCCACAAGAAGCACCGGGAGATGGTTCTGTCGGAGTATTTACCGCGCGTGATGGAGGAGGCCAAGGCGGCGCGTGAGCGGAGGAAGACGCTGAGGCTCTTCACGGTGAAGGACATGCGGATGGGAGGGAGGGTGGAGTTGTGGCAGGGCGTGAATCTTGAGCACCCTGCGACGTTGGCGACAGTGGCTATGGATTCGGACTTGAAGGAGATGATAATTAGGGATTTGGATATGTTTGTGGAGAGGAAGGGTTTATATAAGAGTGTTGGGAAGGCGTGGAAGAGAGGGTACTTGCTTTCGGGTCCCCCTGGTACTGGGAAATCGAGTTTGATTGCTGCCATGGCCAATTATCTGAATTTTGATGTCTATGATTTGGAACTCACCTCTGTTAGGCGAAATTCTGAGCTCAGGAAGTTGCTGATGGCCACCAGGAACCGTTCCATACTTGTTGTGGAAGACATTGATTGTTCCCTTCATTTGCAGGATAGGATTGCAAAACCTACATCATCACAACCCCATTCCCACTCATTTCACAATCCACCATCCCAGGTCACATTATCGGGGTTCCTGAATTTCATAGATGGGTTGTGGTCAAGTTGTGGGGATGAGAGGATCATGGTGTTCACAACGAATCACAAGGACAAATTGGACCCTGCTCTCTTGCGCCCTGGGCGTATGGATGTGCACATTGACATGACCTACTGCACTCCTGGTGGGTTCAAAATGCTGGCTTCCAATTACCTTGGGATCACAGAGCACCCACTTTTTGTTCAAATTGACAAGTTGCTTGGGATGATCAATGTCACTCCTGCGGAAGTGGGGGAGCAGTTTTTGCTGGATCAAGACCCGGAAATTGCACTCAACAGCCTGATAAATCTCCTTCTTGAGAAGAAACGAAATCATGAATTGAAGATGAAAGCACCTCTCATCATTGAATGA 1353 0.5233 MMTPKFQNVVSTAASVAATVMLLRSFTRNYIPPELQHYLYSKLSKFLSFSSELTLVIDQFHGFTLNPLFAAAQLYLKPHEAPNAKRFRATMPSKSRHVSLLMDGNDDITDSFNGVPFRWKLVSRRDKSNSLVHFFEVRFHKKHREMVLSEYLPRVMEEAKAARERRKTLRLFTVKDMRMGGRVELWQGVNLEHPATLATVAMDSDLKEMIIRDLDMFVERKGLYKSVGKAWKRGYLLSGPPGTGKSSLIAAMANYLNFDVYDLELTSVRRNSELRKLLMATRNRSILVVEDIDCSLHLQDRIAKPTSSQPHSHSFHNPPSQVTLSGFLNFIDGLWSSCGDERIMVFTTNHKDKLDPALLRPGRMDVHIDMTYCTPGGFKMLASNYLGITEHPLFVQIDKLLGMINVTPAEVGEQFLLDQDPEIALNSLINLLLEKKRNHELKMKAPLIIE 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00488 450 Gene3D - 187 368 IPR027417 -
Phco9g00488 450 Gene3D - 369 438 - -
Phco9g00488 450 CDD RecA-like_BCS1 210 370 - -
Phco9g00488 450 PANTHER BCS1 AAA-TYPE ATPASE 11 438 - -
Phco9g00488 450 ProSitePatterns AAA-protein family signature. 342 360 IPR003960 GO:0005524|GO:0016887
Phco9g00488 450 Pfam ATPase family associated with various cellular activities (AAA) 236 370 IPR003959 GO:0005524|GO:0016887
Phco9g00488 450 Pfam Domain associated at C-terminal with AAA 31 122 IPR025753 -
Phco9g00488 450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 411 IPR027417 -
Phco9g00488 450 SMART AAA_5 231 374 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00488 Phco-Chr9 3578294 3579742 Dispersed/Wgd