Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00480 ATGTACCTGATTTCAAAAGCCCAAAGATATGCAAGGGTTGATTCTAGGCCTGTGGGATTTTTGGCCTTACAGGCTTTTGATTTTGCAAGTTTTTTCGGCCATGACCGGAATAAGCTATGGGTGTTCATATTGACTACTATAATTATTCAATTTGACACTGGAAGCACTGCCTCATTTCAAAGATCAAGTGGAAAGATGGTTGTCCTTGCTGCATCCATTGTGAGCAAATCTGGAAAAGTGCTAGTTTCTAGGCAGTTTGTGGACATGTCTCGTATCAGAATTGAGGGTCTTCTAGCAGCATTTCCCAAGTTGGTAGGCACTGGAAAGCAGCACACGTATTTTGAGACAGAGAATGTACGCTATGTTTACCAGCCAATAGAAACACTATATCTACTTCTCGTAACAAACAAAAATAGCAACATACTGGAAGATTTGACAACTCTGAGACTTCTCTCCAGACTTGTGCCTGAATATTCTTACTCCCTCGATGAAGAGGGTATTTCTGAACATGCATTTGAGTTGATTTTTGCATTTGATGAAGTCATCTCTCTCGGCCACAAGGAAAATGTGACTGTTGCACAAGTTAAGCAGTTCTGTGAGATGGAGAGTCATGAAGAGAAACTGCACAAACTAGTTATGCAGAGCAAAATCAATGAAACTAAGGATGTTATGAAGCGTAAAGCTAGTGAGATTGATAAAAGCAAGATTGAAAAAAACAAAGTTGATAAAGGGGGATTTGGTCCCTTACAGTCACTAGGCTCTGGAAAATTTGAAAATAGCCTTAGTGATTTGAGCATATCTAGCAGCGGAACTGCTTTTGGAAGTGGCTCTGGTCTCGGATTTAGTTCTGATGTTGATTCCTTTCCTACCAAGTCTAAAGGTCGTCCTACTTCGTCTGCTACCGCTCCATCAAAAGGTCTCGGAATGAAGCTTGGTAAATCCCAAAGGACAAACCAGTTTTTGGAATCATTGAGAGCAGAAGGTGAGGTCTTTCTTGAAGATATTCAGCCGAAACGTAGCCTGTCTCAGGCAGCTGCCCCACCACCTACGGATCCCATCACTTTAACTGTTGAAGAGAAACTAAATGTGACACTAAAACGAGACGGTGGAATCAGTAATTTTGATGTTCAAGGCACATTGTCTCTCCAAATTCTCAGCAAAGAGGATGGACATATTCAAGTTCAGGTCCAGACTGGTGATAATCAAGCCATCATTTTCAAGACACACCCGAACATGAATAAAGAATTATTTTCCAATGAAAATATACTAGGCCTGAAGGATCCCAGTAGACCTTTCCCCACAGGTCAAACTGGTGGTTCTGAAGGTGTTGGTCTTTTAAAGTGGAGAATGCAAAGCACTGATGAATCAATGGTACCACTGACAATCAACTGCTGGCCCTCTTCTTCTGGAAACGATACTTATGTCAGCATCGAGTATGAGGCTTCCTCAATGTTTGATTTGCAGAATGTTGTGATCTCAGTACCTCTTCCATCTCTTCGGGAAGCACCATCTGTTAGCCAGGTTGATGGGGAATGGAGGTATGACTCTAGGAATTCCCTTCTGGAGTGGTCTGTCCTTCTAATTGATAATTCAAACCGCAGTGGATCAATGGAATTTGTTGTTCCACAAGCCGATTCATCAGCATTCTTCCCCATTTCCATTTGTTTTAAAGCAACAGATACATTTAGCAACCTGAAGGTCACCAACACCATACCGCTAAAAGGTGGTAATCCTCCTAAATATTTTCAGAGGACACAGTTGATCACAGAAAACTACCTGGTTGTGTGA 1788 0.4167 MYLISKAQRYARVDSRPVGFLALQAFDFASFFGHDRNKLWVFILTTIIIQFDTGSTASFQRSSGKMVVLAASIVSKSGKVLVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYFETENVRYVYQPIETLYLLLVTNKNSNILEDLTTLRLLSRLVPEYSYSLDEEGISEHAFELIFAFDEVISLGHKENVTVAQVKQFCEMESHEEKLHKLVMQSKINETKDVMKRKASEIDKSKIEKNKVDKGGFGPLQSLGSGKFENSLSDLSISSSGTAFGSGSGLGFSSDVDSFPTKSKGRPTSSATAPSKGLGMKLGKSQRTNQFLESLRAEGEVFLEDIQPKRSLSQAAAPPPTDPITLTVEEKLNVTLKRDGGISNFDVQGTLSLQILSKEDGHIQVQVQTGDNQAIIFKTHPNMNKELFSNENILGLKDPSRPFPTGQTGGSEGVGLLKWRMQSTDESMVPLTINCWPSSSGNDTYVSIEYEASSMFDLQNVVISVPLPSLREAPSVSQVDGEWRYDSRNSLLEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISICFKATDTFSNLKVTNTIPLKGGNPPKYFQRTQLITENYLVV 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00480 595 CDD AP_delta-COPI_MHD 351 592 - -
Phco9g00480 595 FunFam Coatomer subunit delta 353 461 - -
Phco9g00480 595 MobiDBLite consensus disorder prediction 287 304 - -
Phco9g00480 595 MobiDBLite consensus disorder prediction 287 314 - -
Phco9g00480 595 PANTHER COATOMER SUBUNIT DELTA 66 595 IPR027059 GO:0006890|GO:0030126
Phco9g00480 595 Pfam Adaptor complexes medium subunit family 349 569 IPR028565 -
Phco9g00480 595 Gene3D - 68 206 - -
Phco9g00480 595 SUPERFAMILY SNARE-like 70 207 IPR011012 -
Phco9g00480 595 Gene3D Mu homology domain, subdomain B 353 569 - -
Phco9g00480 595 FunFam Coatomer subunit delta 462 557 - -
Phco9g00480 595 SUPERFAMILY Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 350 589 IPR036168 -
Phco9g00480 595 CDD Delta_COP_N 69 198 - -
Phco9g00480 595 Gene3D Mu homology domain, subdomain B 458 557 - -
Phco9g00480 595 FunFam Coatomer subunit delta 68 206 - -
Phco9g00480 595 ProSiteProfiles Mu homology domain (MHD) profile. 350 595 IPR028565 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00480 Phco-Chr9 3511496 3516464 Dispersed