Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00479 ATGAAGGACGCAGATGTGTCAAGGCAGATTCAGCAGATGATCAGGTTCATCCGCCAGGAGGCTGAGGAGAAAGCTAATGAAATATCTGTTGCTGCTGAAGAAGAATTCAATATCGAGAAACTGCAATTACTTGAAGCTGAAAAGAAAAAGATCAGGCAAGAGTATGAACGAAAAGCCAAACAAATTGACGTTCGTAGAAAAATTGAATACTCAACACAATTGAATGCATCCCGAATAAAAGTGCTTCAAGCACAAGATGATGCAGTGATTTCCATGAAGGACGCTGCTAGAAAGGCTCTTTTACGTCTCTCAAATGATAAGAAAGTATACAGGAAACTCGTCAAAGACATGATTGTTCAGGGTTTACTACGCTTGAGGGAACCATCTGTGCTAATAAGATGCAGAGAGGGTGATCGAAAGCTCGTTGAGTCATTGTTAGAGGAATGCAAAAAGGAATATTCAGAGAAAGCAAATGTGCAAGTCCCTAAAGTTACCCTTGATGATCGTGTTTATCTCCCACCACCACCTAAGAATAATGCTGGCTCGGATTCCCATCAACCTTACTGCTCTGGAGGAATAGTGTTGGCATCAGAGGATGGGAAGATTGTGTTGGAAAACACCCTTGATGCACGGTTGGATGTTATTTATCGACAGAAACTGCCCGAGATAAAGAAGCGCATGGGTTTATACTCTAAAACCCTCTTTGGGATCGAAATCCTTTTCCAGGTTTATCGGAGGAGGAAAAAAATGCTTGTGTTGTTTGAAACGCCTGCGGGGTTTGCCCTGTTTAAAGTTCTGGATGAAGGCAAGCTTTCAAAAGTTGAGGACTTGTGGACTAACTTTTCCAGCGCAGACACTGCTAGACAGGTGGTCAAGTTGAAAGCATTTTCTAAATTCGAGAACACTTCCGAAGCTCTAGAAGCAGCTACTTTACTAATTGATGGAAAAGCAAGCAAGGGTCTGCGCAAGTTCTTGCGTGTTCATTGTGAAAATGAAACGCTAGGTGTTGCTGATTCAAAACTTGGAAATGTGATTAAAGAGAAATTGAAAATCGACTGTGTTCACAACAATGCAGTCATGGAGTTGATGAGAGGAGTTAGAAATCAGTTAACTGAACTCATATCTGGTCTAGCTGTTCAAGACATGGCTCCAATGAGCTTGGGTTTATCCCACAGCTTGTCCAGATACAAGTTGAAGTTTAGTGCAGAGAAGGTGGATACCATGATTGTCCAGGCTATTGGTTTACTTGACGATCTTGATAAAGAATTGAATACATATGCCATGAGGGTTCGTGAATGGTATGGTTGGCATTTCCCTGAACTCACTAAAATAATACAAGATAACATTCAATATGCAAGGGCAGTGAAGTTGATGGGTGATCGTGTCAATGCAGCTGGGCTTGATTTCTCTGAGATTTTGTCTGAGGAAGTGGAGGCAGAACTTAAGGAGGCATCTGTAATATCAATGGGAACTGAAATCGGTGAGCTTGATTTGGCAAATATTAGGGAACTCTGTGACCAGGTTTTGTCTCTTTCGGAGTACAGGGCACAGCTCTATGATTATCTAAAGAGTAGGATGAACACCATTGCACCCAATTTGACTGCGATGGTTGGGGAGCTTGTTGGTGCTCGCCTCATTGCCCATGGTGGTAGCTTATTAAACCTTGCAAAGCAGCCTGGCAGCACTGTACAAATTCTTGGTGCTGAGAAAGCTCTCTTTAGAGCACTGAAGACTAAGCACGCTACTCCCAAGTATGGTCTTATATACCATGCATCCTTGATTGGTCAGGCAGCTGCAAAGTTCAAGGGGAAAATTTCTCGGTCACTTGCTGCAAAGACAGCATTGGCTATTAGGTGTGACGCACTTGGAGATGGCCAAGACAACACCATGGGATTGGAGAACAGAGCCAAGCTTGAGGCACGATTGAGGAACCTTGAAGGCAAGGAGTTGGGCCGTTTTGCTGGTTCTGCCAAGGGAAAGCCCAAGATAGAAGCATATGACAAGGACAGAAAGAAAGGACCGGGAGGACTGATAACCCCGGCCAAGACATATAATCCTTCGGCTGATTCAGTTATTGGGCAAATTGTCAATTCTGCCATGGATGAGGATGTACAAGAGCCTCCATCTGTTGCTGATAAAAAGAAAGAAAAGAAGGAAAAGAAGAAAAAGAAGGGGAAAAATGAAGATGACTCGACTGTACAAGCCCATGGAGATGTTGCTGAAGAGGCAGTACCCGAAGTTGTTAAGAAAGAGAAGAAGAAGAAAAGGAAGGAGGCTAGTGAGAGTGCTGAGTTGCAGAATGGGAATGACGAGTTGAATGCAGGAGAGAAGAAGAAAAAGAGGAAAAAGCACGCAGAGCAGGAAGAATCTCCTGAAATGCCAAGCAAGAAGAAAGGAAAAAAAAAGAAAAGTGAGGACTAA 2421 0.4316 MKDADVSRQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLQLLEAEKKKIRQEYERKAKQIDVRRKIEYSTQLNASRIKVLQAQDDAVISMKDAARKALLRLSNDKKVYRKLVKDMIVQGLLRLREPSVLIRCREGDRKLVESLLEECKKEYSEKANVQVPKVTLDDRVYLPPPPKNNAGSDSHQPYCSGGIVLASEDGKIVLENTLDARLDVIYRQKLPEIKKRMGLYSKTLFGIEILFQVYRRRKKMLVLFETPAGFALFKVLDEGKLSKVEDLWTNFSSADTARQVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFLRVHCENETLGVADSKLGNVIKEKLKIDCVHNNAVMELMRGVRNQLTELISGLAVQDMAPMSLGLSHSLSRYKLKFSAEKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIIQDNIQYARAVKLMGDRVNAAGLDFSEILSEEVEAELKEASVISMGTEIGELDLANIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAAKFKGKISRSLAAKTALAIRCDALGDGQDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDKDRKKGPGGLITPAKTYNPSADSVIGQIVNSAMDEDVQEPPSVADKKKEKKEKKKKKGKNEDDSTVQAHGDVAEEAVPEVVKKEKKKKRKEASESAELQNGNDELNAGEKKKKRKKHAEQEESPEMPSKKKGKKKKSED 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00479 806 Pfam snoRNA binding domain, fibrillarin 415 643 IPR002687 -
Phco9g00479 806 FunFam Nucleolar protein 58 533 654 - -
Phco9g00479 806 Gene3D Nop domain 534 646 IPR042239 -
Phco9g00479 806 MobiDBLite consensus disorder prediction 771 806 - -
Phco9g00479 806 Gene3D - 92 233 IPR038495 -
Phco9g00479 806 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 250 803 IPR045056 GO:0030515|GO:0031428|GO:0032040
Phco9g00479 806 SUPERFAMILY V-type ATPase subunit E-like 91 226 - -
Phco9g00479 806 Coils Coil 38 61 - -
Phco9g00479 806 Gene3D - 378 533 - -
Phco9g00479 806 Gene3D - 1 62 - -
Phco9g00479 806 FunFam Probable Nucleolar protein 58 378 532 - -
Phco9g00479 806 SMART NOSIC_2 408 460 IPR012976 -
Phco9g00479 806 ProSiteProfiles Nop domain profile. 529 647 IPR002687 -
Phco9g00479 806 MobiDBLite consensus disorder prediction 656 686 - -
Phco9g00479 806 Pfam ATP synthase (E/31 kDa) subunit 16 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Phco9g00479 806 MobiDBLite consensus disorder prediction 699 806 - -
Phco9g00479 806 Pfam NOP5NT (NUC127) domain 251 315 IPR012974 -
Phco9g00479 806 Hamap V-type proton ATPase subunit E [atpE]. 8 229 IPR002842 GO:0033178|GO:0046961|GO:1902600
Phco9g00479 806 SUPERFAMILY Nop domain 402 646 IPR036070 -
Phco9g00479 806 Coils Coil 14 34 - -
Phco9g00479 806 MobiDBLite consensus disorder prediction 661 675 - -
Phco9g00479 806 MobiDBLite consensus disorder prediction 722 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00479 Phco-Chr9 3496212 3506720 Dispersed