Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00478 ATGTTTGTGAATCATAGAAGATGCTGTGTAATGCTATTTTCGCATGTCCAACTTCGTTATAATTATGTGGAGCTATCTGATGGAGTAGTAGGAAGAAAGAGAGACATGAGAAGGATATTGGTTTTTGTTTTCTTGGTATGGTTCCGCATGGAGACTTGTTCTTCGTTCAGTGACATAGAAGCGTTGCTGAAGCTGAAGCACTCCATGAAAGGACAAAAAGCCAAAGACGAGGCGCTCCAAGACTGGAACTTTTCCGCCCCCCATTCCGCACATTGTTCCTTTTCAGGCGTAACGTGTGATCAAGATCTTCGAGTCGTTTCAATCAACGTCTCCTTCCTTCCCCTCTTCGGATACCTTCCACCGGAGATCGGACACTTGGATAAACTCCAAAGCCTCGTCATAGTGCACAACAACCTCACCGGCCACCTTCCCAAGGACCTCTCTGCCCTCACTTCCCTCAAGCTCCTCAACATCTCTCACAACTCCTTCACCGGAAATCTTCCCGGGGAAATCATTCTTCCTTTGACACAACTCGAGATCTTCGACTCCTACGACAACAGCATCACTGGACCGCTTCCCGAAGAATTCGTGAAACTGGAGAAACTCCGATACCTCAAGCTCGATGGAAATTACTTTTCCGGTAGCATACCGGAGAGTTACTCGGAGTTTAAGAGCTTAGAGGTTTTGAGCTTAAGCACAAACAGTTTATCAGGGAAAATTCCCAAGGGTTTATCTCGGTTGAAGACGCTGACGTACCTCAAACTGGGATACAGCAACGCTTACGAATGTGAGATTCCACCGGATTTCGGCTCCATGACATCTCTGAAATACCTTGACCTCTCCAGCTGCAACCTCAGTGGCGAGATTCCACCGAGCCTAGGAAATTTGAGAAACCTTGACACGTTGTTCTTGCATATGAACAACCTCATCGGAACCATTCCGTCGGAACTCTCTGCTTTGAAGAGCCTTTCATTTCTAGATCTCTCTTTCAACGGCCTCACGGGGGGAATCCCGCCAAGCTTCTCTCCGCTTAGAAACCTCACTCTCCTGAACTTGTTCCACAACAAGCTGTACGGCCCTGTTCCGTCCTTCGTCGGCGAGTTTCCGAAGCTGGAAACGCTGCAGCTCTGGGAGAACAACTTCTCCGGCGCGCTACCTCAAAACCTGGGCCAAAATGGGAGGCTCATGTTCTTCGACGTCACGAGCAATCACTTCACCGGGTTGATCCCTCCGGGTTTGTGCAAGAGTGGGAGGTTACAAACCTTGATCATCACCGATAACTTCTTCCACGGTCCAATCCCTGATGATATTGGAAACTGCACGTCTCTCGTCAAGATCCGAGCCTCCAATAACTACCTTAACGGCGCCATTCCGTCAGGAATTTTCAAACTGCCTTCGGTAAAGATAATCGAGCTCGCTAACAACCGTTTTAACGGCGAACTACCTCCGAAGATTTCCGGTGATTCTCTGGGGATTCTCACGCTTTCCAACAACTTGCTGACGGGGAGAATCCCCCCGGCGTTGAAGAACTTGAGGGCACTGCAGACACTCTCACTCGACGTTAACGAGTTGGTCGGAGAAATCCCGGGGGAGGTTTTTGTCTTACCAATGCTAACCACCATCAACATAAGCGGCAACAATCTGACGGGAGCAATCCCAACGACGTTGATTAACTGCGTTTCACTCTCCTCCGTTGACCTCAGCCGGAACATGCTCATCGGGGAGATTCCGAAGGGCATAAAAGAGCTCACGATCTTGAGCATTTTGAATGTTTCGAGAAACCATTTGACAGGGCGAGTCCCTGAGGAGATTGGGTTGATGAGTAGCTTGGCCACGCTGGATCTCTCCTTCAACAATTTCAACGGCAAGCTCCCTACTGGTGGCCAGTTTTCTGCTTTCAACGACAACGCCTTTGCCGGGAACCCCAACCTCTCTCTCAATCAAAGATCCTCGTTAAACCCTGTTTCAGCTGCTGCTACCTCTCCCATTTTTACATTTCTAAATATAATATCTGTTATTATAAATTATCTACATCTGTATTATTACAAACTGTAA 2055 0.4818 MFVNHRRCCVMLFSHVQLRYNYVELSDGVVGRKRDMRRILVFVFLVWFRMETCSSFSDIEALLKLKHSMKGQKAKDEALQDWNFSAPHSAHCSFSGVTCDQDLRVVSINVSFLPLFGYLPPEIGHLDKLQSLVIVHNNLTGHLPKDLSALTSLKLLNISHNSFTGNLPGEIILPLTQLEIFDSYDNSITGPLPEEFVKLEKLRYLKLDGNYFSGSIPESYSEFKSLEVLSLSTNSLSGKIPKGLSRLKTLTYLKLGYSNAYECEIPPDFGSMTSLKYLDLSSCNLSGEIPPSLGNLRNLDTLFLHMNNLIGTIPSELSALKSLSFLDLSFNGLTGGIPPSFSPLRNLTLLNLFHNKLYGPVPSFVGEFPKLETLQLWENNFSGALPQNLGQNGRLMFFDVTSNHFTGLIPPGLCKSGRLQTLIITDNFFHGPIPDDIGNCTSLVKIRASNNYLNGAIPSGIFKLPSVKIIELANNRFNGELPPKISGDSLGILTLSNNLLTGRIPPALKNLRALQTLSLDVNELVGEIPGEVFVLPMLTTINISGNNLTGAIPTTLINCVSLSSVDLSRNMLIGEIPKGIKELTILSILNVSRNHLTGRVPEEIGLMSSLATLDLSFNNFNGKLPTGGQFSAFNDNAFAGNPNLSLNQRSSLNPVSAAATSPIFTFLNIISVIINYLHLYYYKL 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00478 684 Gene3D Ribonuclease Inhibitor 172 260 IPR032675 -
Phco9g00478 684 SUPERFAMILY L domain-like 361 631 - -
Phco9g00478 684 Gene3D Ribonuclease Inhibitor 365 655 IPR032675 -
Phco9g00478 684 FunFam Leucine-rich repeat receptor-like protein kinase 219 311 - -
Phco9g00478 684 Pfam Leucine rich repeat N-terminal domain 57 100 IPR013210 -
Phco9g00478 684 FunFam Leucine-rich repeat receptor-like protein kinase 56 218 - -
Phco9g00478 684 Gene3D Ribonuclease Inhibitor 261 364 IPR032675 -
Phco9g00478 684 Gene3D Ribonuclease Inhibitor 57 171 IPR032675 -
Phco9g00478 684 FunFam Leucine-rich repeat receptor-like protein kinase TDR 341 657 - -
Phco9g00478 684 Pfam Leucine Rich Repeat 323 343 IPR001611 GO:0005515
Phco9g00478 684 Pfam Leucine Rich Repeat 274 296 IPR001611 GO:0005515
Phco9g00478 684 SUPERFAMILY RNI-like 107 430 - -
Phco9g00478 684 SMART LRR_typ_2 223 247 IPR003591 -
Phco9g00478 684 SMART LRR_typ_2 272 296 IPR003591 -
Phco9g00478 684 SMART LRR_typ_2 607 640 IPR003591 -
Phco9g00478 684 SMART LRR_typ_2 464 488 IPR003591 -
Phco9g00478 684 SMART LRR_typ_2 150 174 IPR003591 -
Phco9g00478 684 SMART LRR_typ_2 320 343 IPR003591 -
Phco9g00478 684 SMART LRR_typ_2 511 535 IPR003591 -
Phco9g00478 684 SMART LRR_typ_2 368 392 IPR003591 -
Phco9g00478 684 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 53 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00478 Phco-Chr9 3489469 3496013 Tandem