Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00453 ATGAAGGCGTGGTGGAGGAGGCTGTTCTATGTTGCGGTGTTTGAGACGGTGTTGATCGGAATGGGAAGCGCCCACGACTATTGGGACGCATTGTCGAAGGCCATTATTTTCTTCGAGGGACAGCGATCGGGATTCCTGCCACAGGATCAGAGAGTGAGTTGGCGAGGGAACTCCGGTCTCAGTGACGGCTGGAACTACAACACGGATCTCACCGGCGGTTACTACGACGCCGGCGACAACGTGAAATTCGGGTTTCCGATGGCCTTCACCACCACAATGCTGGCCTGGAGCGTGCTGGAATTCGGAGACGTCATGCCTCCCAATGAGCTCAGGAACGCACTCCTCGCGATTCGTTGGGCCACTGATTATCTTCTCAAGACTCTTTCTCAGCCCAATCGAATTTTCGTCCAGGTGGGTGATCCAAACTCAGATCACGATTGTTGGGAGAGGCCAGAGGACATGGATACAGCGAGGACTACGTATGCTATTGATGCACCAAACGCCGCTTCCGATGTCGCCGGCGAAACTGCCGCCGCACTAGCAGCTTCATCCATGGCGTTCCGGTCATCGGACCCCGGTTACTCTGAGACACTGCTTCGAAATGCTCTTACTGCCTTTGAATTTGCAGATAACTATAGGGGTGCTTACAGTGACAATGAAAATGTGAAGTATAATGCCTGCCCCTATTACTGTGATTTCGATGGCTATCAGGATGAGCTGTTGTGGGGAGCTGCATGGCTAAGGAGGGCGACGCAGGATGATAATTTCCTAAACTACATTGAAAGCAATGGGAAAACTCTTGGTGCAGATGACAACATCAATGAGTTTGGTTGGGACAACAAGCATGCTGGCCTCAACGTACTTCTCTCCAAGGAAGTTATAGAAGGAAACATGTACTCTCTTGAATCCTACAAGTCCTCAGCAGAGAGGTTCATTTGCACAGTGATACCTGAATCGCCAAGCTCAAACATTCAGTACACACCTGGTGGGCTTGTGTACAGACCCGGAGGCAGCAACTTGCAACATGCAACTTCAATTGCTTTCCTTGAATTGGTGTATGCCAATTACCTAACACACACTTCACAAGCCATCAATTGTGGCAATGTCTATGTCAGTGCACAAACTCTTCGCCAACATGCTAAGAGGCAAGTTGATTACATTTTGGGTGAAAACCCAATGGGACTATCCTACATGGTTGGCTATAGTAACTACTATCCTCAACGTATTCACCACCGTGCCTCTTCTTTACCCTCCATCAAGGATCATCCCCAGTTCATTGCATGCAAAGAAGGTTCAATCTACTACAACTCAACAAATCCCAATCCTAATGTACTTGTTGGAGCCATTGTTGGAGGACCTGACGAAAATGATGATTATGAGGATGATCGAATTGATTTTAGGAAATCTGAACCTACCACGTACATTAATGCACCATTTGTTGGGGTGTTAGCATATTTTGCTGCAAATCCCAGCCTTAGTTGA 1482 0.4818 MKAWWRRLFYVAVFETVLIGMGSAHDYWDALSKAIIFFEGQRSGFLPQDQRVSWRGNSGLSDGWNYNTDLTGGYYDAGDNVKFGFPMAFTTTMLAWSVLEFGDVMPPNELRNALLAIRWATDYLLKTLSQPNRIFVQVGDPNSDHDCWERPEDMDTARTTYAIDAPNAASDVAGETAAALAASSMAFRSSDPGYSETLLRNALTAFEFADNYRGAYSDNENVKYNACPYYCDFDGYQDELLWGAAWLRRATQDDNFLNYIESNGKTLGADDNINEFGWDNKHAGLNVLLSKEVIEGNMYSLESYKSSAERFICTVIPESPSSNIQYTPGGLVYRPGGSNLQHATSIAFLELVYANYLTHTSQAINCGNVYVSAQTLRQHAKRQVDYILGENPMGLSYMVGYSNYYPQRIHHRASSLPSIKDHPQFIACKEGSIYYNSTNPNPNVLVGAIVGGPDENDDYEDDRIDFRKSEPTTYINAPFVGVLAYFAANPSLS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00453 493 Gene3D - 23 489 IPR012341 GO:0005975
Phco9g00453 493 Pfam Glycosyl hydrolase family 9 27 483 IPR001701 GO:0004553|GO:0005975
Phco9g00453 493 PANTHER ENDO-1,4-BETA-GLUCANASE 14 487 - -
Phco9g00453 493 FunFam Endoglucanase 23 491 - -
Phco9g00453 493 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 459 477 IPR033126 -
Phco9g00453 493 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 386 412 IPR018221 -
Phco9g00453 493 SUPERFAMILY Six-hairpin glycosidases 13 488 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00453 Phco-Chr9 3241343 3245467 Dispersed/Wgd