Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00449 ATGGCTTTGAAAGTCACACACTCCACACTACCTCCGTCTTCTTCCGTTTCACACCATTTTCATGTTCATACTCTTTCAAAACCTTTTTTTCTTTCACATTCCAAAATCTCAACCTCTTTAATCTCCAAAACCCTTTGTCTGTGTGCATCACCTTCCAACACCATCCACTCTTCACCAACCCCCATTTTCCTCCCATATCTCCAACCAGAACCAGAACCAGAACCAGAAGAACAAGAGGTCATAGAAACAATAGAAGAAGAAAAAGAACAAGCTCGCGACCCAGATGATCCAATCTACAAATTCTTCAAAACCCGCAATAGGATTTCCTTCCAAGACCCGGGAATAGAAGGAAGTTTGTCGCTTCAGAAGAACCGTCGCATATCATGGCACCTTGCTTCTGACATCAGTGACCTTGTTGAAGAAGAATCTGAAACGGGTTTGGAGGATGGTTCTTTGTTGGTTGAAGAAAAGAAAGAAAAGGTGTGTGAGAAAAAGGGTTTGCCTTTACCTGAGGGGATTGTGGGGGAGATTGTTCAGCTTGCAAGGAACTTGCCGCAGAATCTTACTCTGGAGGAGGGTTTGGTTGAATACGAAGGAAGGGTCAGTGAGAAAGAGTGTTGGGAGGTTTTGAAATCACTTGGGGAGGAGCACCTACTGGTATCTTGTTTGTATTTCTTTCAGTGGATGAGGTCGCAGGAACCTTCACTGGTGACACCTCGGGCTTGCACTGTGTTGTTTCCTTTGTTGGGGAAGGCAAGGATGGCTGATAAGTTGATGGTTTTGTTCTCAAACTTACCATCCAACAAGGAGTTCAGAGATGCTCATGTTTACAATGCTGCAATTTCAGGCCTTCTTTCTTGTGGCAGGTATGAAGATGCTTGGAAAGTGTATGAGTCAATGGAAGCGGATAATGTGCTGCCGGATCACGTGACATGCTCTATTATGGTTATTGTTATGAGAAAACTTGGCCATAGTGCAAAAGATGCATGGCAATTTTTTGAAAAAATGAATGGAAAAGGAGTCAAATGGGGTGAAGAAGTTCTAGGTGCACTCATAAAGTCATTTTGTGTTGAGGGTTTGATGAGGGAAGCTCTCATCATCCTATCTGAAATGGAGAAGAAAGGGGTTTCTCCAAATGCTATTATGTACAACACCCTGATGGATGCATATTTTAAATCCAACTGTGTAGAAGAAGCTGAAGGCCTTCTTGTTGAGATGAAAGCTAAAGGGATTAAGCCCACTGAAGCTACGTTCAACATTCTAATGCATGCATACAGCAGAAAAATGCAGCCTAAGATTGTGGAGAAGCTGATTGCTGAAATGCTGGATGTTGGGTTGAAGCCAAATGCCAAATCATATACTTGTCTAGTCAGTGCATATGGGAAGCAGAAAAAGATGAGTGACATGGCTGCAGATACATTCTTGAAGATGAGGAAAGATGGTATTAAACCCACTTCACATTCTTATACAGCTCTGATCCATGCATATTCAGTTAGTGGCTGGCATGAGAAAGCTTATGCAGCATTTGAAAACATGCAAAGGGAAGGTGTTAAACCATCCATAGAAACCTATACTGCTTTACTAGATGCATTTAGACGGGCTGGCGATACCGAAACATTAATGAAAATATGGAAGTTGATGAGGAGGGAAAAAGTAGAAGGAACACGGGTGACATTCAATACTCTTGTTGATGGTTTTTCTAAACATGGTCACTACAAGGAAGCAAGAGATGTAATATCTCAATTTGGGAAAGTTGGATTGCATCCAACATTGTTGACGTACAATATGCTGATGAATGCGTATGCACGAGGAGGGCGACACTCAAAGCTGCCAGAGTTGTTGGAAGAGATGGCAGATCGTAACTTAAAGCCAGATTCTGTAACTTATTCAACAATCATATATGCATTTATCCGCGTTCGAGATTTTGCTCAGGCATTCTTTTATCACCAGGAGATGGTCAAGAATGGTAAGGTAATGGATGCCAATTCTTACCAGAAGCTTCGGACGATTCTTGATGATAAAGCTGCAATAAAAAACAGAACGGATAGGAGATCCTTGATTGGAGTGGTTAGAAATAAGATGGGTGTTGTGAAACCTAAGAGAAAAAAGGACGAGCTATGGAAGTACAGGAAAAGACATGTGAAAAAACGGTAG 2154 0.4183 MALKVTHSTLPPSSSVSHHFHVHTLSKPFFLSHSKISTSLISKTLCLCASPSNTIHSSPTPIFLPYLQPEPEPEPEEQEVIETIEEEKEQARDPDDPIYKFFKTRNRISFQDPGIEGSLSLQKNRRISWHLASDISDLVEEESETGLEDGSLLVEEKKEKVCEKKGLPLPEGIVGEIVQLARNLPQNLTLEEGLVEYEGRVSEKECWEVLKSLGEEHLLVSCLYFFQWMRSQEPSLVTPRACTVLFPLLGKARMADKLMVLFSNLPSNKEFRDAHVYNAAISGLLSCGRYEDAWKVYESMEADNVLPDHVTCSIMVIVMRKLGHSAKDAWQFFEKMNGKGVKWGEEVLGALIKSFCVEGLMREALIILSEMEKKGVSPNAIMYNTLMDAYFKSNCVEEAEGLLVEMKAKGIKPTEATFNILMHAYSRKMQPKIVEKLIAEMLDVGLKPNAKSYTCLVSAYGKQKKMSDMAADTFLKMRKDGIKPTSHSYTALIHAYSVSGWHEKAYAAFENMQREGVKPSIETYTALLDAFRRAGDTETLMKIWKLMRREKVEGTRVTFNTLVDGFSKHGHYKEARDVISQFGKVGLHPTLLTYNMLMNAYARGGRHSKLPELLEEMADRNLKPDSVTYSTIIYAFIRVRDFAQAFFYHQEMVKNGKVMDANSYQKLRTILDDKAAIKNRTDRRSLIGVVRNKMGVVKPKRKKDELWKYRKRHVKKR 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00449 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 555 589 IPR002885 -
Phco9g00449 717 Gene3D Tetratricopeptide repeat domain 174 327 IPR011990 GO:0005515
Phco9g00449 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 485 519 IPR002885 -
Phco9g00449 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 625 659 IPR002885 -
Phco9g00449 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 520 554 IPR002885 -
Phco9g00449 717 Pfam PPR repeat 350 376 IPR002885 -
Phco9g00449 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 590 624 IPR002885 -
Phco9g00449 717 PANTHER MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1 375 667 - -
Phco9g00449 717 Pfam Pentatricopeptide repeat domain 437 496 IPR002885 -
Phco9g00449 717 Pfam Pentatricopeptide repeat domain 509 564 IPR002885 -
Phco9g00449 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 414 448 IPR002885 -
Phco9g00449 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 449 484 IPR002885 -
Phco9g00449 717 Gene3D Tetratricopeptide repeat domain 509 716 IPR011990 GO:0005515
Phco9g00449 717 Gene3D Tetratricopeptide repeat domain 328 471 IPR011990 GO:0005515
Phco9g00449 717 Pfam PPR repeat family 378 426 IPR002885 -
Phco9g00449 717 Pfam PPR repeat family 273 316 IPR002885 -
Phco9g00449 717 Pfam PPR repeat family 590 636 IPR002885 -
Phco9g00449 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 273 307 IPR002885 -
Phco9g00449 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 344 378 IPR002885 -
Phco9g00449 717 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 379 413 IPR002885 -
Phco9g00449 717 NCBIfam pentatricopeptide repeat 350 380 IPR002885 -
Phco9g00449 717 NCBIfam pentatricopeptide repeat 417 450 IPR002885 -
Phco9g00449 717 NCBIfam pentatricopeptide repeat 523 553 IPR002885 -
Phco9g00449 717 NCBIfam pentatricopeptide repeat 487 520 IPR002885 -
Phco9g00449 717 NCBIfam pentatricopeptide repeat 557 590 IPR002885 -
Phco9g00449 717 NCBIfam pentatricopeptide repeat 276 308 IPR002885 -
Phco9g00449 717 NCBIfam pentatricopeptide repeat 593 626 IPR002885 -
Phco9g00449 717 NCBIfam pentatricopeptide repeat 381 415 IPR002885 -
Phco9g00449 717 NCBIfam pentatricopeptide repeat 627 660 IPR002885 -
Phco9g00449 717 NCBIfam pentatricopeptide repeat 452 485 IPR002885 -