Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00411 ATGAGTGCCTCCAGGTTCATCAAGTGTGTCACCGTCGGTGACGGTGCCGTCGGCAAGACTTGCATGCTTATCTCCTACACCAGCAACACTTTCCCAACGGACTATGTGCCGACTGTCTTTGACAATTTCAGTGCAAATGTAGTGGTGGATGGAAGCACTGTGAATCTTGGGTTGTGGGATACGGCTGGCCAAGAAGATTACAACAGATTAAGACCCTTAAGCTATCGTGGAGCAGATGTTTTCCTGCTTGCTTTCTCTCTCATAAGCAGGGCCAGTTATGAAAATGTTGCCAAAAAGTGGATTCCTGAGTTGAGGCATTATGCTCCTGGTGTTCCAATTATTCTTGTTGGAACAAAACTTGATCTTCGGGATGATAAGCAGTTCTTCCAAGATCATCCTAGCGCAGTGCCCATCACCACAGCACAGGGTGAGGAACTGAGAAAGCTCATCGGTGCTCCAGTTTATATTGAATGTAGTTCAAAAACACAACAGAATGTGAAGGCTGTTTTTGATGCGGCCATCAAGGTAGTTCTCCAGCCCCCAAAGCAGAAGAAAAAGAAGAGAAAGGGGCAAAAGGCCTGTTCCATTTTGTGA 594 0.463 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFQDHPSAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKQKKKKRKGQKACSIL 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00411 197 FunFam rac-like GTP-binding protein RAC2 5 194 - -
Phco9g00411 197 SMART rab_sub_5 7 180 - -
Phco9g00411 197 ProSiteProfiles small GTPase Ras family profile. 2 197 IPR001806 GO:0003924|GO:0005525
Phco9g00411 197 Pfam Ras family 8 178 IPR001806 GO:0003924|GO:0005525
Phco9g00411 197 NCBIfam small GTP-binding protein domain 7 171 IPR005225 GO:0005525
Phco9g00411 197 SMART rho_sub_3 9 180 IPR001806 GO:0003924|GO:0005525
Phco9g00411 197 PRINTS Transforming protein P21 ras signature 30 46 - -
Phco9g00411 197 PRINTS Transforming protein P21 ras signature 155 177 - -
Phco9g00411 197 PRINTS Transforming protein P21 ras signature 47 69 - -
Phco9g00411 197 PRINTS Transforming protein P21 ras signature 109 122 - -
Phco9g00411 197 PRINTS Transforming protein P21 ras signature 7 28 - -
Phco9g00411 197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 178 IPR027417 -
Phco9g00411 197 Gene3D - 5 192 IPR027417 -
Phco9g00411 197 ProSiteProfiles small GTPase Rho family profile. 1 177 - -
Phco9g00411 197 SMART ras_sub_4 4 180 - -
Phco9g00411 197 CDD Rop_like 6 178 - -
Phco9g00411 197 ProSiteProfiles small GTPase Rab1 family profile. 2 197 - -
Phco9g00411 197 PANTHER RHO FAMILY GTPASE 4 195 IPR003578 GO:0005525|GO:0007264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00411 Phco-Chr9 2925283 2927459 Dispersed/Transposed