Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00398 ATGGAATCCGATGCTTCTAAAATAATTGCTTCTGCCACTCTGAGAGGGCGTGTTACTGATCATAACAGAACAAAACACAGACCATACCCAAGCAAGAAAAAAGACCAACTCCAACGTATGGATCTCATACCACTCTCATGTCTCACTCTCATTGCTCTCCTCTTCACTCCCTCAGGGGTTATGGCTGCCACCTTCACATTTGTTAACCGATGCGATTACACAGTGTGGCCAGGCATTCTCGCAAATGCGGGTAGCCCACCACTCCAAAGCACCGGCTTCGAGCTTCCCAAGGACACTTCTCGCGCCTTCCAAGCTTCCACCGGCTGGTCCGGTCGTTTCTGGGCCCGAACTGGTTGCACCTTCGACGGATCCGGATCCGGCTCCTGTCTCACCGGAGACTGCGGCTCCGGCCAAGTCGAATGCAACGGCGCCGGAGCCGCCCCGCCGGCCACACTCGCCGAGTTCACGCTGGGCACCGGAGGTCAAGACTTCTACGACGTCAGCCTCGTCGACGGCTACAACCTTCCAATGATCGTGGAGGGTACTGGCGGGTCGGGTCTATGCGCCTCCACGGGCTGCACGTCGGATCTGAACCAGCAATGCCCCGCGGAGCTGAGAGCCTCTGAGGGAAGCGCGTGCAAGAGCGCGTGCGAGGCTTTTGGTAGTCCCGAGTACTGCTGCAGCGGCGCGTACGGCTCACCCGCCACCTGTAGGCCCTCCATTTACTCGGAGATGTTCAAGGCCGCTTGCCCCAGATCGTATAGCTACGCGTACGATGATGCTACCAGTACGTTTACGTGTAGCGGCGCTGATTATACCGTTACCTTCTGTCCATCCTCTCCAAGTCAGAAATCTTCACGAGATACCACTAACCCCATGCCCTCAACATCATCATCATCACAAGGGTCAGGGACAGTGACAGGAACGGAAACAGGAACAGGAATGATGGGATCCGAAGGAGGAGCAGTGGTGTACACGGGTGCGGAAAACGGCGTTGCGTATGACTCCGTTACGAATTCCGGGTCAAGTTCAGGATCCGGAGGAGAAACAATGCTTGCAGATGGGTCATATTTAGCTGGATTGGCCATGGGAGAGTCCTCCCCCAGAAAAACAGTTTCCATGGCGTTTGTGTCCTCAGCTAGCTTTTTGCTTATTTTCACCTTGCTTTAG 1170 0.5538 MESDASKIIASATLRGRVTDHNRTKHRPYPSKKKDQLQRMDLIPLSCLTLIALLFTPSGVMAATFTFVNRCDYTVWPGILANAGSPPLQSTGFELPKDTSRAFQASTGWSGRFWARTGCTFDGSGSGSCLTGDCGSGQVECNGAGAAPPATLAEFTLGTGGQDFYDVSLVDGYNLPMIVEGTGGSGLCASTGCTSDLNQQCPAELRASEGSACKSACEAFGSPEYCCSGAYGSPATCRPSIYSEMFKAACPRSYSYAYDDATSTFTCSGADYTVTFCPSSPSQKSSRDTTNPMPSTSSSSQGSGTVTGTETGTGMMGSEGGAVVYTGAENGVAYDSVTNSGSSSGSGGETMLADGSYLAGLAMGESSPRKTVSMAFVSSASFLLIFTLL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00398 389 ProSiteProfiles Thaumatin family profile. 62 278 IPR001938 -
Phco9g00398 389 ProSitePatterns Thaumatin family signature. 125 141 IPR017949 -
Phco9g00398 389 Gene3D Thaumatin 63 278 IPR037176 -
Phco9g00398 389 PRINTS Pathogenesis-related protein signature 163 179 IPR001938 -
Phco9g00398 389 PRINTS Pathogenesis-related protein signature 112 123 IPR001938 -
Phco9g00398 389 PRINTS Pathogenesis-related protein signature 125 154 IPR001938 -
Phco9g00398 389 PRINTS Pathogenesis-related protein signature 64 76 IPR001938 -
Phco9g00398 389 PRINTS Pathogenesis-related protein signature 268 277 IPR001938 -
Phco9g00398 389 MobiDBLite consensus disorder prediction 280 320 - -
Phco9g00398 389 SUPERFAMILY Osmotin, thaumatin-like protein 63 279 IPR037176 -
Phco9g00398 389 FunFam THAUMATIN-LIKE PROTEIN 1 63 278 - -
Phco9g00398 389 Pfam Thaumatin family 69 278 IPR001938 -
Phco9g00398 389 PANTHER OS03G0233200 PROTEIN 53 278 IPR001938 -
Phco9g00398 389 MobiDBLite consensus disorder prediction 280 314 - -
Phco9g00398 389 SMART tha2 65 278 IPR001938 -
Phco9g00398 389 CDD TLP-PA 64 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00398 Phco-Chr9 2798327 2802637 Dispersed/Tandem