Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00389 ATGGAGCCACGGGAGCAGGTTCATGATCAAGGATCCGAACTCCTTTCGGAGGAGGCTGTAGTTGATAAACAGGATGATGCCTACACTGCCAGTGCATTGACTTCGGCTTTGGTGGATGAAAAAGGTCCAGATGTCGTTCAGGAGCATGATTCCTCTGAGGAGGCTGATTCTGAGTATGGGAAGCTGGGGGAAACCGATGTAATTGCTTATCAGGATTTGGAAAGGGATGGGCCGGGAACTCATAGTGTTCATCTGAATGGTGTTGCTTCTGGAGTGTCTGGAGATGGAGATTTTTGTGATGGTTCTAATGGTGTGGTGGATGATAATTTGGAGCGTAGTGATGGAGGTGGTGGAAAGGAAGAGTCTGGGTTAAATTCTGATGTAGAGGTGGTAGTTAAGGAGAATGGTGTTGTGGTGGATGAAAACTCTGGTTTGATGAGTGAGAAAGCTGAAGTTGATGATTCTGAATTCATGACTCCCAGAGAAAATGGTGTTAAAACATTGGATGATGTAAGCACAGACAAGGAGGACGGTGTCGCCACTGAGGTTATTATCAAATCTGAATCCAGTGATGTGATTCCAGCTGAAGGTACTGAGGCTGGGGATTTGAAGGAGTGCGACGCAGATCCTGAACTTGGAGATGACAATATAGAGGTAAACTTAAATGCTTCAGCTGATTCTTCTGGTGAGATTCAAGATGATACATGTGAAGAAGTACATGGCAATTCAGCTCACGTTACTTTAGAACAACAGGATGAAGTAACTAGGGATGTGAAGGATGTTACTCTGGGCACTGATATAAGCCATGAGGATAGAATTGGTGAAGAAATGAGCACCCCTAGCATTCAGAATACTGAACTAACTGGTTATGGAAATGGTGATGGCGAACACGAAAGCTCATCCTTTTTGGATAATCCCTCAACTAAGGAGACATTGCCTATTGAGGAGGGTAGTGCAGCTGATCCAAAGGAAGGAAGTAATAAGGATGATCAATCTCAGATTTCAGATGAAAATCATAGAGATGATGACAACTCTCATGTGGTTGAAGAGCCTGAAAGTACACAGGAGAAGATTATTCAAGAGACGGAAACCACACAAGAGACTGGAGAGCAACCTGTTCAACCTTCAGCAGATATTTCTTCTTCATCTGAAAATTCTTCTGGTGCTGGGCCTCGACCTGTTCTTCCTTCATCTGAAAATTCTGCTGCTGCTGGGCCTCGACCTGTTCTTCCTTCATCTGAAAATAATGCCTCTGCTGGGCCTCGACCTGTTCTTTCTTCATCTGAAAATTCTGCGGCTGATGGGCCTCGACCTGTTCTTCCTTCATCTGAAAATTCTGCGGCTGCTGGGCCTCGACCTGTTCTTCCTTCACCTGAAAATTCTGCGGCTGCTGGGCCTCGACCTGTTCTTCCTTCACCTGAAAATTCTGCTGCCGCTGGGCCCACTCCTGTTCTTCCAGCTGGCCTTGGTCGTGCAGCCCCATTACTGGAACCTGCCTCTCGGCTGGTCCAGCAGCCTCGTGCTAATGGTACTGTGTCAAACACTCAGTCCCAGCAAATGGAGGACTCCTCGAGTGGGGAGGCTGAGGAGTCTGACGAGACACGTGAGAAACTTCAGATGATCAGGGTGAAGTTTTTACGGTTGGCTCATAGGCTTGGGCAAACTCCCCATAATGTTGTTGTAGCTCAAGTTTTATATAGATTAGGACTAGCTGAGCAACTAAGAGGAAGGAATGGAGGCCGTGTTGGTGCTTTTAGCTTTGACCGTGCAAGTGCAATGGCTGAGCAGCTTGAAGCTGCAGGTCAGGAGCCACTTGATTTCTCTTGTACAATAATGGTCCTTGGAAAGACTGGAGTTGGTAAAAGTGCTACCATCAATTCCATTTTTGATGAGGTTAAGTTTAATACTAGTGCTTTTAATATGGGAACCAAGAAGGTTCAGGATGTCGTGGGAACAGTGCAGGGTATTAAGGTACGGGTCATTGATACGCCAGGACTTCTACCTTCCTGGTCAGACCAGCGAAGCAATGAGAAGATCCTCCTCTCTGTGAAGAACTTCATTAAGAAAACTCCTCCTGATATTGTGTTATATCTTGATAGGTTAGATATGCAAAGCAGGGATTTTAGTGACATGCCACTCTTACGCACAATTACGGAAATTTTTGGGCCATCCATTTGGTTCAATGCCATTGTGGTTCTGACTCATGCAGCATCTGCTCCCCCTGAAGGCCCCAATGGCACTGCTTCAAGTTATGACATGTTTGTTACTCAGCGTTCTCATGTTGTGCAGCAAGCCATTCGCCAAGCAGCTGGTGACATGCGTCTCATGAATCCTGTATCCTTGGTAGAGAACCACTCTGCTTGCCGAACAAACAGGGCTGGCCAGAGAGTATTGCCAAATGGCCAGGTTTGGAAGCCTCATTTGTTACTTTTATCTTTTGCCTCTAAAATTCTGGCTGAAGCAAATGCTCTTCTAAAGTTACAAGATAGTCCACCTGGGAAGCCTTATATAGCTCGACGAGCACCTCCGTTACCTTTTCTTTTGTCAACCCTTCTTCAATCAAGACCACAGTTAAAGTTGCCACAGGAGCAGTTTGGTGATGAGGACAGTCTTGATGATGACCTTGATGAGGCATCAGAGTCTGATGATGAGAATGAACATGATGACTTGCCGCCATTTAAACCTTTAACAAAGGCCCAGGTGGAAAAGCTGTCTAAAGCTCATAAGAAAGCATATTTTGACGAGTTAGAGTATAGGGAAAAGCTTTTGATGAAGAAACAATTGAAAGAAGAAAAAAAGCGACGGAAATTCATGAAGAAAATGGCAGAAGCAGCTAAAGATCTACCTAGTGATTACAGTGAAAATGTGGAAGAAGAAGGTGGTGGTGCAGCTTCTGTTCCTGTTCCGATGCCAGATTTGGCCCTGCCTGCATCTTTTGATTCTGATAACCCCACTCACCGATATCGTTATCTTGATTCATCAAACCAGTGGCTTGTTAGACCTGTTCTAGAAACTCATGGATGGGATCATGATGTGGGTTATGAAGGTCTGAATGTTGAAAGATTGTTTGTTGTCAAGGACAGGGTACCTTTGTCTTTCACGGGTCAGGTTACTAAAGATAAAAAGGATGCTAATGTTCAGATGGAAATAGCCGGCTCAGTTAAGCATGGGGAAGGGAAAGCAACTTCATTAGGTTTTGATATGCAGACTGTGGGGAAGGACTTGGCTTATACATTACGCAGTGAGACAAGATTTACTAATTTTAGAAGAAATAAGGCAACCGCTGGTCTCTCATTCACTTTACTTGGTGACGCCTTATCAGGTGGAGTTAAGATTGAAGACAAATTGGTTGCTAGTAAGCGATTCAAGGTGGTTATCAGTGGTGGTGCAATGGCAGGGCGCAACGACATTGCTTACGGTGGCAGTTTGGAGGCTCAGTTGAGAGATAAGGATTACCCTTTAGGTCGTTTCTTATCCACTCTCGGGCTCTCTGTTATGGATTGGCATGGAGATCTTGCTGTTGGGTGCAATGTGCAATCTCAAATCCCAGTTGGACGACATACAAACCTGGTTGCCCGGGCCAATTTGAACAATCGAGGGGCAGGACAAATAAGTATTCGATTAAACAGTTCAGAACAGCTTCAAATTGCGTTGGTTGCTCTCATCCCTCTCGTAAAGAAGCTAGTTGGTTATCCTCAACAATTGCAGTATGGACAATATTAA 3723 0.4502 MEPREQVHDQGSELLSEEAVVDKQDDAYTASALTSALVDEKGPDVVQEHDSSEEADSEYGKLGETDVIAYQDLERDGPGTHSVHLNGVASGVSGDGDFCDGSNGVVDDNLERSDGGGGKEESGLNSDVEVVVKENGVVVDENSGLMSEKAEVDDSEFMTPRENGVKTLDDVSTDKEDGVATEVIIKSESSDVIPAEGTEAGDLKECDADPELGDDNIEVNLNASADSSGEIQDDTCEEVHGNSAHVTLEQQDEVTRDVKDVTLGTDISHEDRIGEEMSTPSIQNTELTGYGNGDGEHESSSFLDNPSTKETLPIEEGSAADPKEGSNKDDQSQISDENHRDDDNSHVVEEPESTQEKIIQETETTQETGEQPVQPSADISSSSENSSGAGPRPVLPSSENSAAAGPRPVLPSSENNASAGPRPVLSSSENSAADGPRPVLPSSENSAAAGPRPVLPSPENSAAAGPRPVLPSPENSAAAGPTPVLPAGLGRAAPLLEPASRLVQQPRANGTVSNTQSQQMEDSSSGEAEESDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFNTSAFNMGTKKVQDVVGTVQGIKVRVIDTPGLLPSWSDQRSNEKILLSVKNFIKKTPPDIVLYLDRLDMQSRDFSDMPLLRTITEIFGPSIWFNAIVVLTHAASAPPEGPNGTASSYDMFVTQRSHVVQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDSPPGKPYIARRAPPLPFLLSTLLQSRPQLKLPQEQFGDEDSLDDDLDEASESDDENEHDDLPPFKPLTKAQVEKLSKAHKKAYFDELEYREKLLMKKQLKEEKKRRKFMKKMAEAAKDLPSDYSENVEEEGGGAASVPVPMPDLALPASFDSDNPTHRYRYLDSSNQWLVRPVLETHGWDHDVGYEGLNVERLFVVKDRVPLSFTGQVTKDKKDANVQMEIAGSVKHGEGKATSLGFDMQTVGKDLAYTLRSETRFTNFRRNKATAGLSFTLLGDALSGGVKIEDKLVASKRFKVVISGGAMAGRNDIAYGGSLEAQLRDKDYPLGRFLSTLGLSVMDWHGDLAVGCNVQSQIPVGRHTNLVARANLNNRGAGQISIRLNSSEQLQIALVALIPLVKKLVGYPQQLQYGQY 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00389 1240 MobiDBLite consensus disorder prediction 250 276 - -
Phco9g00389 1240 Pfam AIG1 family 609 742 IPR006703 GO:0005525
Phco9g00389 1240 FunFam Translocase of chloroplast 120, chloroplastic 581 828 - -
Phco9g00389 1240 NCBIfam chloroplast protein import component Toc86/159, G and M domains 486 1240 IPR005690 GO:0003924|GO:0005525|GO:0009707|GO:0045036
Phco9g00389 1240 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 608 1155 IPR045058 -
Phco9g00389 1240 MobiDBLite consensus disorder prediction 1 64 - -
Phco9g00389 1240 MobiDBLite consensus disorder prediction 1 24 - -
Phco9g00389 1240 CDD Toc34_like 581 826 - -
Phco9g00389 1240 MobiDBLite consensus disorder prediction 504 524 - -
Phco9g00389 1240 MobiDBLite consensus disorder prediction 141 176 - -
Phco9g00389 1240 MobiDBLite consensus disorder prediction 859 895 - -
Phco9g00389 1240 MobiDBLite consensus disorder prediction 92 128 - -
Phco9g00389 1240 MobiDBLite consensus disorder prediction 503 535 - -
Phco9g00389 1240 MobiDBLite consensus disorder prediction 277 312 - -
Phco9g00389 1240 MobiDBLite consensus disorder prediction 146 160 - -
Phco9g00389 1240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 602 743 IPR027417 -
Phco9g00389 1240 Gene3D Insect antifreeze protein 349 454 - -
Phco9g00389 1240 ProSiteProfiles AIG1-type G domain profile. 606 835 IPR006703 GO:0005525
Phco9g00389 1240 Gene3D - 578 826 IPR027417 -
Phco9g00389 1240 MobiDBLite consensus disorder prediction 42 61 - -
Phco9g00389 1240 Pfam Translocase of chloroplast 159/132, membrane anchor domain 966 1229 IPR024283 -
Phco9g00389 1240 MobiDBLite consensus disorder prediction 321 357 - -
Phco9g00389 1240 Coils Coil 928 948 - -
Phco9g00389 1240 MobiDBLite consensus disorder prediction 242 486 - -
Phco9g00389 1240 MobiDBLite consensus disorder prediction 867 886 - -
Phco9g00389 1240 MobiDBLite consensus disorder prediction 358 394 - -
Phco9g00389 1240 MobiDBLite consensus disorder prediction 411 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00389 Phco-Chr9 2737201 2740923 Dispersed