Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00383 ATGATTTCACGTGAGAGTTCTGGCACCGTGTCCGTGAGTGTTGCGAGTGCGGAGGAGTTTCGAGACAGCAAGCCCAACCCCAGCAAAGGCAACCACTTTAACCACGATGAGTGGTTGTGGACTCTACTCTACTCTATTCTACTCTACTCAGTCTACCACAAGAATGTCATGACACGAGTTGAAGATAGAGAGGGTTTTGTGAGTGTGAAAGTGAATGGTAGATCTGAAGACTTAAAAGTGATGTTCAATGGCTCTCATAATGGGAAACCAAAACAGTTGAAATTGGAAGTCCTTGCTTGGAACTTCAACTGTGGTTGGTTGGTTCCTAACATGGAGAGATCCTATGTTTTTGTTTTTCTCTGTGTCTCCGTGCTTTGTCTCTTCCTGTCCGAAACCGCCAGATCAGAAGACGATTCCCAACCACTTCTAGCTCTCAAATCCTCCATTGACGTTCTACACAAGCTCCCATGGCGACAAGGAACCGACGTGTGCACCTGGGAAGGGGTCAGAGACTGCTTCAACGGAAGAGTCAGAAAGCTCGTCCTAGAACACTCCAACCTAACCGGTTCTCTCGATTCCAAGATCTTGAACCGTTTGGACCAGCTCCGAGTTCTCAGCTTCAAAGGAAACTCACTCTCCGGCCAAGTCCCTGACCTCTCCGCCTTGATAAACCTCAAATCGATTTTCCTCAGCAACAACAACTTCTCCGGCAAGTTCCCCTCCTCGCTCGCGCTACTCCACCGCGTCAAGGTCATTGTCCTGTCGCAAAACCACATCTCCGGCGACATTCCAGCGTCGCTACTGAATCTCCGGCGACTCTACATCCTCTACCTGGAAGACAACGCGTTCACGGGAAGCATCCCGGGTTTCAATCAAACCAGCCTCAGGTATTTAAATGTCTCCAACAACCGACTCTCCGGCGAGATTCCGCTGACCGCCGCCCTGATCCGGTTCAATGCGTCGTCGTTTTCAGGCAACCCGGGGCTCTGCGGGGAGAACATCCACCAACCGTGCAAAAACGGCAGCGTTTCGTTGGCGCCGTCGATAAGCCCCAGCCATCCGCTGGTCCCGGGAGTCACCGCGACGGCATCGAACCGCACGAAGCTGATAAAGATAATTGGAGGGTGCGTTGGTGGAGTTGTTTTTATTGTGGTGTGCATGGTTGTGGTGTGGGCGATTTGCAGGAAGCGGAAGACGAGGGTGGGTTCCGGAACGAGGAGCAAGGGCGGTGCTGAGGTGGGAGAGGGGGAGGCTGGTGCGGCGGGGAGTGGTGGAGGTGGCGGCGGAGACGGCGGGGATAGTAATAAAGAAGGGGGTTTTGCGTGGGAAGGTGAGGGTCTAGGGAAGCTGGTGTTCTGCGGAGGAGGTGATCGCGAGATGAGTTATAGTTTGGAGGATTTGCTGAAGGCTTCGGCGGAGACTTTGGGGAGGGGTATTATTGGAAGTACTTATAAAGCAGTTATGGAATCTGGGTTCATTGTCACTGTTAAGAGGTTGAAGGATGCTAGGTACCCTGGTTTGGAAGAGTTCAGAGCTCACATTCATGTCCTTGGGAGGCTCACCCACCCTAACTTGGTCCCACTCAGAGCTTATTTTCAGGCTAAGGAAGAACGTCTTCTCGTCTATGATTACTTTCCCAATGGCAGCCTCTTCTCCCTTATTCACGGATCAAAAACATCTGGCGGGGGAAAGCCTCTTCACTGGACATCCTGCCTTAAGATTGCGGAAGATCTAGCAACAGGCCTGCTCTATATCCACCAGAACCCCGGCATGACACATGGAAACCTAAAATCTTCTAATGTGTTGCTTGGTTCTGATTTTGAGTCATGTCTTACTGATTATGGTCTCACTGTGTTCCTAAATCCTGAATCAATGGATGAGCCTAGTGCCACTTCTTTATTCTATAGAGCACCTGAGTGCCGCAACTTTCAGAGGTCACAAACTCAACCAGCTGATGTATACAGCTTTGGGGTCCTTGTTCTAGAGCTTCTAACTGGCAAAACACCCTTCCAAGACCTTGTTCAAACGTATGGTTCAGACATACCTAGGTGGGTCCGGTCAGTGCGCGAAGAAGAGACAGAGTCCGGGGATGATCCTGCCTCAGGCAATGAAGCATCAGAAGAGAAGCTTCAGGCTCTTTTGAACATTGCCATGGCATGTGTTTCACTGGTGCCAGAAAACAGGCCTACAATGAGAGAGGTTTTAAAGATGATAAAAGATGCAAGAGGGGAGGCGCATGTCTCATCTAACAGTAGTGATCACTCCCCTGGTAGATGGTCAGATACTGTTCAAAGCTTTCCAAGGGAAGAACACCAGAGCATATGA 2325 0.5049 MISRESSGTVSVSVASAEEFRDSKPNPSKGNHFNHDEWLWTLLYSILLYSVYHKNVMTRVEDREGFVSVKVNGRSEDLKVMFNGSHNGKPKQLKLEVLAWNFNCGWLVPNMERSYVFVFLCVSVLCLFLSETARSEDDSQPLLALKSSIDVLHKLPWRQGTDVCTWEGVRDCFNGRVRKLVLEHSNLTGSLDSKILNRLDQLRVLSFKGNSLSGQVPDLSALINLKSIFLSNNNFSGKFPSSLALLHRVKVIVLSQNHISGDIPASLLNLRRLYILYLEDNAFTGSIPGFNQTSLRYLNVSNNRLSGEIPLTAALIRFNASSFSGNPGLCGENIHQPCKNGSVSLAPSISPSHPLVPGVTATASNRTKLIKIIGGCVGGVVFIVVCMVVVWAICRKRKTRVGSGTRSKGGAEVGEGEAGAAGSGGGGGGDGGDSNKEGGFAWEGEGLGKLVFCGGGDREMSYSLEDLLKASAETLGRGIIGSTYKAVMESGFIVTVKRLKDARYPGLEEFRAHIHVLGRLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGMTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPESMDEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLVLELLTGKTPFQDLVQTYGSDIPRWVRSVREEETESGDDPASGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIKDARGEAHVSSNSSDHSPGRWSDTVQSFPREEHQSI 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00383 774 MobiDBLite consensus disorder prediction 401 438 - -
Phco9g00383 774 Pfam Protein kinase domain 472 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00383 774 Gene3D Ribonuclease Inhibitor 135 290 IPR032675 -
Phco9g00383 774 Gene3D Phosphorylase Kinase; domain 1 456 544 - -
Phco9g00383 774 Gene3D Transferase(Phosphotransferase) domain 1 545 761 - -
Phco9g00383 774 ProSiteProfiles Protein kinase domain profile. 469 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00383 774 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 124 743 IPR046959 -
Phco9g00383 774 SUPERFAMILY Protein kinase-like (PK-like) 473 749 IPR011009 -
Phco9g00383 774 Gene3D Ribonuclease Inhibitor 291 341 IPR032675 -
Phco9g00383 774 MobiDBLite consensus disorder prediction 745 774 - -
Phco9g00383 774 MobiDBLite consensus disorder prediction 748 774 - -
Phco9g00383 774 FunFam Nuclear pore complex protein NUP107 135 289 - -
Phco9g00383 774 Pfam Leucine rich repeat N-terminal domain 136 170 IPR013210 -
Phco9g00383 774 SUPERFAMILY L domain-like 138 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00383 Phco-Chr9 2704391 2708564 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phco9g00383 Pkinase 2e-35 CL0016