Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00374 ATGGTAGTGATCATGCAACAGCAGCAGCAGCAACAACAGCAACAGCAGAACCCTTCTGCACTGGTGCCATACCTCAAAAATCCCCAATCCTCAACCTCCACCGTCGCCGCCGCAACCGCAACCCCCGCCGCCACTTCCATTAGGTCGCCCTCATCGCAGTCGCCGATCTCCGTCGTTGCTCCCCCCCGCCAACCCCCGCTCTCATCGCATCCGGTGCCAGTTACGGCGGTGGAGCCTGCTTTGACGGCGGTTCCGACGTGTCCGCTGGTGAGAGTCCGCCTCTCGGACATTGGCCCCTATGATGGGGCACCGGCGGGGCCGTATCTGAGAGCAATGGAGGCGCTGTGTGGGTCTCTGCTGCGGCACAATGCCGCGTTGATCGAATTAGGGAGCGAGGACACTGCTCTGATGCGATGCGGCTTGGAAGGTGCAAGGTTGTTTTTCAGAAGTAGGGCCCAACTTGGTGTTGGGAAGGGTAGCCGTGGGGTTTACATGTACAGAGCAGGAAGGGCTTTGGAGGATTGGGATTATTCTCCCCCCTGCATGGCTGATATTTTTAGATGCATGGGAAAGGCATCTCGATCTTCCTTGAGTGCCATTGCAAAATATTTACGTCTTAGAAGCGATGTTTTTAACCATTTGCTCGATGATGCTCCCTTGCCTGCTAATGAGGTGTCATCGTCAGTTCTTGTTGCGACATACTCACATTCTTCTTTGCAAAATGGAAGAGGTGCCATTGGCGGTGGTAAGCCTACCATGAATGGTGAAGTTGAAAAGGGATTGTTGACGTTGATATCTTCTGACACTCCTGGTCTTCAGATATGTGACCCCAGTGGTCGCTGGTATCTGGCTGACAGTGGTTCTGGCCCTGGAGATCTTTTACTGATAACAGGCAAGGCGCTTAGTCATGCTACTGCTGGTCTACGTCCCGCTGCATCATATAGAGCTTCTCCTGATTATTTTCTGAGTCCTAATGGGGGAGGAAGGACTTCTCTTGCATATAGACTCATGCCACAGGGCAATGCTATATTAGATTGTTCCCCAATAGCAGCAGCTGGCCATGTTATTCCCCAAAGCTATGTTCGAATTTCTGTAAGCCAATTTATGGATGACCTTGCTGCTGAAGAATTGACAGGCAGCAGATGTGATAATGCTGATGTTGCAGCTCAAAACAGTATGAACAAGGAGCCATCATTAAGAAGTGTTCTATCAGATCCTTTATCTGGCACATTCCTTGAAGATGCCATGTTTGTCTCTTGTGGACATTCTTTTGGTGGTCTTATGCTGAGGAGAGTCATTGAAACATCCAGATGTACTCTCTGCAATACAGAAATTGAAACTGGTCCTTTGGTCCCTAATCTTGCTCTTAGAGCTGCAGCTGCTGCTGTCAAGCATGAGGATGAACGGAGGTTATTTCGTAATGCTGCTCTCCGAAAGCGGCGGAAAGAAATGGGTGACCAAATGGATTCAATGAGAAGAGTGAACAGGGAAAATGGAGATTATAGTGCTGCTGATGGACAGCGGGGAGTGCAATATCCATTCTCGGTAAATGAGAAAGTCATTATTAAGGGTAACAGAAGAACACCAGAAAAATTTGTTGGGAAAGAAGCTGTGATTACATCTCAGTGTCTCAATGGCTGGTATTTGCTTAAGATTATTGAAACTGGAGAGAATGTCCGTCTGCAGTACCGTTCTCTTAGGAAGCTCTTAATCTCATCAGTGGACCAGTGTCCCTCACTACCAATTCAAAATACCAGCTCTTAA 1764 0.4881 MVVIMQQQQQQQQQQQNPSALVPYLKNPQSSTSTVAAATATPAATSIRSPSSQSPISVVAPPRQPPLSSHPVPVTAVEPALTAVPTCPLVRVRLSDIGPYDGAPAGPYLRAMEALCGSLLRHNAALIELGSEDTALMRCGLEGARLFFRSRAQLGVGKGSRGVYMYRAGRALEDWDYSPPCMADIFRCMGKASRSSLSAIAKYLRLRSDVFNHLLDDAPLPANEVSSSVLVATYSHSSLQNGRGAIGGGKPTMNGEVEKGLLTLISSDTPGLQICDPSGRWYLADSGSGPGDLLLITGKALSHATAGLRPAASYRASPDYFLSPNGGGRTSLAYRLMPQGNAILDCSPIAAAGHVIPQSYVRISVSQFMDDLAAEELTGSRCDNADVAAQNSMNKEPSLRSVLSDPLSGTFLEDAMFVSCGHSFGGLMLRRVIETSRCTLCNTEIETGPLVPNLALRAAAAAVKHEDERRLFRNAALRKRRKEMGDQMDSMRRVNRENGDYSAADGQRGVQYPFSVNEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIETGENVRLQYRSLRKLLISSVDQCPSLPIQNTSS 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00374 587 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 400 468 IPR013083 -
Phco9g00374 587 MobiDBLite consensus disorder prediction 1 58 - -
Phco9g00374 587 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 87 570 - -
Phco9g00374 587 SUPERFAMILY RING/U-box 399 465 - -
Phco9g00374 587 Gene3D - 166 399 IPR027443 -
Phco9g00374 587 MobiDBLite consensus disorder prediction 1 71 - -
Phco9g00374 587 SUPERFAMILY Clavaminate synthase-like 182 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00374 Phco-Chr9 2635028 2645726 Dispersed