Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00373 ATGGCAACCCTTCCTGGAAAGCAAGCTCCTTCGAATGGGTCTGTCTATGTGTGCAACTTACCCTACGGGACTGACGAAAATATGTTGGCTGAATATTTTGGCACCATTGGATTAGTGAAGAAAGATAAACGTACAGGGAGACCAAAAATATGGTTATATCGAGACAAAGAGACTAATGAGCCAAAGGGAGATGCTACTGTAACATATGAAGATCCACATGCTGCTTTAGCGGCTGTTGAATGGTTTAACAACAAAGATTTTCATGGCAGTTTAATTGGAGTTTTTATAGCAGAATCAAAAAACAAGGATGACCAAACTTATAATTCAGCAGCAGTAGAACCGGTAGATGCTGGTAATGTTGTTGGATTAGAGGAGGCTACCAAGGATGTTAATGGTGGTAGTGGAAGAGGTAGAGGTCAAATTGATCCTTCAGGCAAAGCATGGCAACAAGATGGCGATTGGTTGTGTCCGAATACAAGCAGTTGCTCCAATGTGAACTTTGCCTTTCGCGGTGCATGTAATCGCTGTGGAACTGCCCGTCCTGCTGGTGCTGCTGGAATATCAGGGGCTGGTGGCCGTGGCAAGGGACGTGCTGCTGGACAAGAATCAGGGGGTGCTGGCCGGCCAGCTGGTGGGGGACTATTTGGTCCCAATGATTGGCCTTGTCCAATGTGTGGCAATATCAATTGGGCGAAGCGGACTAAATGCAATATTTGCAATACAAATAAGCCTGGGCATAATGAGGGTGGTGTTAGAGGAGGACGAGGTGGAGGTTACAAAGAGCTTGATGAAGAGGAAATAGAAGAAACCAGACGTCGTAGGAGGGAAGCTGAAGATGATGGGGAGTTGTATGATGAATTTGGAAACCTAAAGAAAAAATTCCGTGCCAAAACACAGCAAGCTGAAGCTGCACGAGGGATTCCTGGTTCCGGACGCGCTGGTTGGGAGGTTGAAGAACTAGGGATAGACCGGGATGGTAGAGAAAGTAGAGACAGAGGAAGGGAACGTAATGATGGTGAGAGCAGGAACAGAGAGCGAAGTGACAAAGAGAGGCAAAGCAGTTGGAATAGAGACAGGGACAGGGGAAGAGATCGAGATCGAGACTGGGACTATGTTGATCGAGATAGGGATTATGGGCGTGATCGGGATCGTAGTAGACATCGATATTAA 1170 0.4675 MATLPGKQAPSNGSVYVCNLPYGTDENMLAEYFGTIGLVKKDKRTGRPKIWLYRDKETNEPKGDATVTYEDPHAALAAVEWFNNKDFHGSLIGVFIAESKNKDDQTYNSAAVEPVDAGNVVGLEEATKDVNGGSGRGRGQIDPSGKAWQQDGDWLCPNTSSCSNVNFAFRGACNRCGTARPAGAAGISGAGGRGKGRAAGQESGGAGRPAGGGLFGPNDWPCPMCGNINWAKRTKCNICNTNKPGHNEGGVRGGRGGGYKELDEEEIEETRRRRREAEDDGELYDEFGNLKKKFRAKTQQAEAARGIPGSGRAGWEVEELGIDRDGRESRDRGRERNDGESRNRERSDKERQSSWNRDRDRGRDRDRDWDYVDRDRDYGRDRDRSRHRY 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00373 389 ProSiteProfiles Zinc finger RanBP2 type profile. 216 245 IPR001876 -
Phco9g00373 389 MobiDBLite consensus disorder prediction 257 280 - -
Phco9g00373 389 SUPERFAMILY Ran binding protein zinc finger-like 210 246 IPR036443 -
Phco9g00373 389 Gene3D - 12 95 IPR012677 -
Phco9g00373 389 MobiDBLite consensus disorder prediction 246 280 - -
Phco9g00373 389 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 13 99 IPR000504 GO:0003723
Phco9g00373 389 SMART rrm1_1 14 95 IPR000504 GO:0003723
Phco9g00373 389 MobiDBLite consensus disorder prediction 187 212 - -
Phco9g00373 389 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 15 91 IPR000504 GO:0003723
Phco9g00373 389 SUPERFAMILY RNA-binding domain, RBD 10 102 IPR035979 GO:0003676
Phco9g00373 389 Pfam Zn-finger in Ran binding protein and others 151 181 IPR001876 -
Phco9g00373 389 Pfam Zn-finger in Ran binding protein and others 219 245 IPR001876 -
Phco9g00373 389 CDD RRM_SARFH 15 97 - -
Phco9g00373 389 FunFam Zinc finger Ran-binding domain-containing protein 2 211 245 - -
Phco9g00373 389 PANTHER ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATED 128 385 - -
Phco9g00373 389 ProSiteProfiles Zinc finger RanBP2 type profile. 150 182 IPR001876 -
Phco9g00373 389 Gene3D - 148 184 - -
Phco9g00373 389 Gene3D - 215 246 - -
Phco9g00373 389 Coils Coil 260 280 - -
Phco9g00373 389 MobiDBLite consensus disorder prediction 295 389 - -
Phco9g00373 389 FunFam TATA-binding protein-associated factor 2N isoform X1 148 183 - -
Phco9g00373 389 MobiDBLite consensus disorder prediction 127 146 - -
Phco9g00373 389 SMART zf_4 218 242 IPR001876 -
Phco9g00373 389 SMART zf_4 152 179 IPR001876 -
Phco9g00373 389 ProSitePatterns Zinc finger RanBP2-type signature. 220 239 IPR001876 -
Phco9g00373 389 FunFam HIV Tat-specific factor 1 12 96 - -
Phco9g00373 389 MobiDBLite consensus disorder prediction 317 389 - -
Phco9g00373 389 SUPERFAMILY Ran binding protein zinc finger-like 145 183 IPR036443 -