Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00370 ATGGAGAAAGTTCGTCCAATGGGACAATTACACTCCCAACATTTCTCGACGACTCTTCGAAAGAGCGCTGAGGGTTTTACTCAGAGTCAGCTTCTCTCGCATAGCCACACAACAGCAGCTGCAGCAATGGCTCCCAAGCGTGGTGGAAAAGCTCCTGCTCTTGCCGCTAAGAAGAAGCCTGAGAAGGTTACGAACCCGCTTTTTGAGAAGCGTCCGAAGCAGTTCGGAATCGGAGGAGCGTTGCCGCCGAAGAGGGACTTGACTAGGTTCGTGAAGTGGCCCAAGACCGTTCAGATTCAGAGGAAGAAGAGGATTCTGAAGCAGAGGTTGAAGGTTCCTCCAGCTTTGAACCAGTTCACAAAGACACTCGACAAAAACCTAGCTACAAGTCTGTTCAAGATTCTTTTGAAGTACAGGCCCGAGGATAAAGCAGAGAAGAAAGAAAGGCTTTTGAAAAGGGCTCAGGCAGAGGCTGAAGGAAAAACTATTGAAGCCAAGAAGCCTATTAATGTGAAGTATGGTCTCAACCATGTTACCTACCTCATTGAGCAGAACAAAGCACAGCTTGTTGTGATTGCTCATGATGTGGACCCAATTGAATTGGTTGTCTGGCTTCCAGCATTGTGCAGGAAAATGGAAATCCCATACTGCATTGTGAAAGGAAAGGCTCGCTTGGGAACGGTCGTTCATAAGAAAACCGCATCTGTTTTGTGCTTGACAACTGTTAAGAATGAAGATAAATTGGAGTTCAGCAGAGTCTTGGAGGCCATTAAGGCTAACTTCAATGACAAATATGACGAGTACAGAAAGAAGTGGGGTGGTGGAATCATGGGATCCAAATCCCAAGCCAAAACCCGGGCAAAGGAAAGGCTTCTTGCCAAGGAAGCTGCCCAGAGGATGTCTTAG 906 0.4713 MEKVRPMGQLHSQHFSTTLRKSAEGFTQSQLLSHSHTTAAAAMAPKRGGKAPALAAKKKPEKVTNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAEKKERLLKRAQAEAEGKTIEAKKPINVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGTVVHKKTASVLCLTTVKNEDKLEFSRVLEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTRAKERLLAKEAAQRMS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00370 301 ProSitePatterns Ribosomal protein L7Ae signature. 209 226 IPR004037 GO:0042254|GO:1990904
Phco9g00370 301 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 85 277 - -
Phco9g00370 301 MobiDBLite consensus disorder prediction 19 61 - -
Phco9g00370 301 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 159 248 IPR004038 -
Phco9g00370 301 Gene3D - 93 276 IPR029064 -
Phco9g00370 301 Coils Coil 144 164 - -
Phco9g00370 301 FunFam 60S ribosomal protein L7a 93 276 - -
Phco9g00370 301 SUPERFAMILY L30e-like 131 272 IPR029064 -
Phco9g00370 301 PRINTS Ribosomal protein L7A family signature 89 106 IPR001921 -
Phco9g00370 301 PRINTS Ribosomal protein L7A family signature 167 187 IPR001921 -
Phco9g00370 301 PRINTS Ribosomal protein L7A family signature 228 252 IPR001921 -
Phco9g00370 301 PRINTS Ribosomal protein L7A family signature 72 89 IPR001921 -
Phco9g00370 301 PRINTS Ribosomal protein L7A family signature 260 280 IPR001921 -
Phco9g00370 301 PRINTS Ribosomal protein L7A family signature 109 128 IPR001921 -
Phco9g00370 301 PRINTS Ribosomal protein L7A family signature 133 146 IPR001921 -
Phco9g00370 301 PRINTS Ribosomal protein L7A/RS6 family signature 190 203 IPR018492 -
Phco9g00370 301 PRINTS Ribosomal protein L7A/RS6 family signature 171 185 IPR018492 -
Phco9g00370 301 PRINTS Ribosomal protein L7A/RS6 family signature 206 216 IPR018492 -
Phco9g00370 301 PRINTS Ribosomal protein L7A/RS6 family signature 216 230 IPR018492 -
Phco9g00370 301 MobiDBLite consensus disorder prediction 19 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00370 Phco-Chr9 2614012 2618674 Dispersed