Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00366 ATGATTCTGCAACACGCTTTTTCCATTTCACACTTCTCTTCACTCTCCCCTTCTCTTTGTCCATGTAACGCCGCATTTCCTTTCTCCAGAAGAACCAGAAAGCGTTTATTCGCCAATTCCGGTTCCCGCAAATTCCGAAGAAAACGCACCGTTCGCTTCTGCGCTCTTCCCTCAGACGTTTCCAACCAAAACTGGAATTCCGAATTCGCCAATTCCGCGCGGAGGACCGCCACAACCTTCGTTCTCAAACGAATTTCCAATCAACTTCACGCCGACAACAACACTAGCAACGATGTTGATGATATCGAGCTGCACGATTCAGCTTCACCGTCGTCGTCGTCGTCGCCGCCGTCGTCGGTTCAATTAGGCTCAAACTTCACCGGTTTCCGCGAGGATCCTATTGTGGATAAGCTGCGGACGCAGCTAGGGGTCATTCACCCGATTCCGTCGCCTCCGATAAACCGCAACGTGGTCGGCTTGTTCGTGTTCTTCTTCTTCGTCGGCGTTGTGTTCGATAAACTGTGGACTTCGCGGCGGCGGAGCAAGAGCAGCGGAGAGGACGGGCTGCGTGGCGTGTGGCCGCAGGTGCCGACGAGCTTCTCGCTGTTCCTGGAGAAGGATTTGCAGAGGAAGGAGTCGGTGGAGTGGGTGAACATGGTGTTGGGGAAGTTGTGGAAGGTGTATAGAGGTGGAATTGAGAATTGGATTATTGGGTTGCTTCAGCCTGTGATTGATAATTTGAAGAAGCCTGATTACGTTCAGAGGGTTGAGATTAAGCAGTTCTCGTTAGGAGATGAGCCGTTGTCTGTTAGGAATGTTGAGCGCAGGACTTCTCGCAGGGTCAACGATTTGCAGTACCAGATAGGCATTAGGTACACAGGTGGTGCTCGCATGCTGTTGATGCTTTCTCTGAAATTTGGCATCATTCCAATTGTCGTGCCTGTTGGTGTTCGAGATTTTGACATTGATGGCGAACTTTGGGTAAAATTAAGACTAATACCAACAGAGCCATGGGTGGGAGCTGTTTCATGGGCTTTTGTTTCACTTCCCAAGATCAAGTTTGAACTATCTCCATTCCGTCTGTTCAATTTAATGGCAATTCCAGTTCTCTCGATGTTTTTAACTAAACTTCTCACTGAAGATTTACCCAAATTATTTGTTCGACCAAAGAAAATTGTTTTAGATTTTCAAAAAGGAAAAGCTGTTGGTCCAGTTGCTGATGATGTTAAATCTGGAGAAATGCAAGGAAATAAAGATTCTGTGGGTGAACTATCTGTTACTTTGGTGGATGCTCGAAAGCTTTCTTATATTTTCTATGGCAAGACAGATCCTTATGTTGTTCTTGGCCTTGGTAATCAAATTATACGCAGCAAAAAGAACAGTCAAACCACTGTAATTGGACCCCCAGGAATGCCAATTTGGAATCAGGATTTTCACATGCTTGTTTCCAACCCTAGAAAACAAAAGTTATTCATCCAAGTAAAGGACGCTCTAGGATTTGCAGATTTGACTATTGGTACAGGAGAGGTTGATTTGGGATCTCTTAAAGACACTGTACCAACAGACAAAATTGTGGTTTTACAAGGAGGTTGGGGATTTTTAGGAAAGCGCTCTTGTGGCGAGATATTGCTTCGGCTAACATATAAAGCATATGTGGAGGATGAGGAAGATGATAAAACTGAGATGGACTCCATTTATACTGATGTTTCTGATGACGAGTTGTCTGATTCAGAAGTAAATGTCACTGACGAGAGGGATGAAAGATATTCTGTGTCTGAAATAGATAAAGAGTCATTTATGGATGTTTTGGCAGCATTAATCGTTAGCGAAGAATTTCAGGGGATAGTAGCATCTGAAACAGTGTTGGGCAAAGTTTTGGATAATGGCTCAAATGCTGGATCTAAAGTGTCAAAGTCTTCGGTTCCCAATGCTGAACCAATCCCTTCTAGTTCTGATAATTCTGTAGGCTCTGCTGGAGGGTCAGCCTTAGTTTGGCTTGCTGTGATTACTAGCATATCACTACTAATTGCTCTCAATGTTGGGGGATCCAGTCTCTTCAATCCTTAA 2067 0.4475 MILQHAFSISHFSSLSPSLCPCNAAFPFSRRTRKRLFANSGSRKFRRKRTVRFCALPSDVSNQNWNSEFANSARRTATTFVLKRISNQLHADNNTSNDVDDIELHDSASPSSSSSPPSSVQLGSNFTGFREDPIVDKLRTQLGVIHPIPSPPINRNVVGLFVFFFFVGVVFDKLWTSRRRSKSSGEDGLRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGIENWIIGLLQPVIDNLKKPDYVQRVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGIRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTEPWVGAVSWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTEDLPKLFVRPKKIVLDFQKGKAVGPVADDVKSGEMQGNKDSVGELSVTLVDARKLSYIFYGKTDPYVVLGLGNQIIRSKKNSQTTVIGPPGMPIWNQDFHMLVSNPRKQKLFIQVKDALGFADLTIGTGEVDLGSLKDTVPTDKIVVLQGGWGFLGKRSCGEILLRLTYKAYVEDEEDDKTEMDSIYTDVSDDELSDSEVNVTDERDERYSVSEIDKESFMDVLAALIVSEEFQGIVASETVLGKVLDNGSNAGSKVSKSSVPNAEPIPSSSDNSVGSAGGSALVWLAVITSISLLIALNVGGSSLFNP 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00366 688 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 422 551 IPR035892 -
Phco9g00366 688 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 42 688 - -
Phco9g00366 688 MobiDBLite consensus disorder prediction 631 655 - -
Phco9g00366 688 Pfam C2 domain 422 520 IPR000008 -
Phco9g00366 688 CDD C2 424 518 - -
Phco9g00366 688 SMART C2_3c 423 524 IPR000008 -
Phco9g00366 688 MobiDBLite consensus disorder prediction 106 122 - -
Phco9g00366 688 ProSiteProfiles C2 domain profile. 410 525 IPR000008 -
Phco9g00366 688 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 210 397 IPR031468 GO:0008289
Phco9g00366 688 Gene3D C2 domain 402 551 IPR035892 -
Phco9g00366 688 MobiDBLite consensus disorder prediction 92 122 - -
Phco9g00366 688 CDD SMP_SF 232 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00366 Phco-Chr9 2578583 2591613 Dispersed/Transposed