Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00355 ATGGCAAAAGAGGGAAACGACATTGATGAAGTAAACGACGCCGTCCATGGCACGGGGGAACAGGAAGAAGAGGAAGAACACGCAGCACAGGAGGAAGATGACAATGACATTGAAGAAGAGGATGAGTATACTTTCAGGTTCGAAAACGGGATGAATCCTTTGGACTTCATCGATAACAATGACGATTCCGGTCTTCAACCCTACGAGCGATTCGAACGTCTCGAACAGGAAGCTCTCGCCGATAAAAAGCGAAAAGCAACTGAATGCCACAGTGAAGAGCCACCTTCTAAGATGAGTAGGGAAAGTGATATTTCCGGGTCAAAGATAGCTGAGATAATGGAAGCAATGAATTATCATGGTGTGCGCAAGAGATCAAGAAAGCCTAAAAAGAGAGGCAGGCGAAAAGGATCAAAGAATAAAATGGACCCTAGGCTAACACGGATGCTGGGTGATGCCACACTTCACTATGCATGTGGCCATTATGACAAGGCTAAAGCTGTGTTGCTTGAAGTTATTAAGTTGGCACCGAATTTGCCTGATTCTTATCACACCCTTGGACTTGTCTGTAGTTCACTCCAGGATTATAAAAGAGCTATGAGTTTTTACCTAATTGCTGCTCATTTGACTCCAAAAGATTCATCTCTTTGGAAAAGGATTTTTACCTGGTCCATAGAACAAGGTTATATTGATCAAGCCCGGCATTGTCTTTTAAGAGCAATAACAGCAGATCCCAAAGATGTTACTCTTAGAGGTCTTCTTGCAAGGCTTTATGTTGAACTTGGAGACTATCAAAAGGCTGCTGTTACATATGAGCAAGTACATCAACTCTGTTATGAGAATGTTGATCCACTGAAAGCTGCAGCTAAGTTGTACAAAAAATGTGGTCAAGTTGAACACGCTGTTCGTATTCTTGAAGACTATCTTAAGAGTCAACCTGACGGAGCAAATGCAAGTGTAGTTGATCTGCTGTGTACCATATTGATGGAAACTAAGGCGCATGATAGTGCTCTGCAGTATATTGAACATGCTCAAGCTGTAAATGCATGGAAAGAATTGCCATTGAATTTGAAAATTAAGGCTGGAATTTGCCATGCTCATCTTGGAAAAATGGATATGGCTCAGGTTCTCTTGAATGATTTGAAACCAGAGAATGCAAGCAAGCATGTTGACTTGGTCATTGAGGTTGCTGACTCATTAATGGGTCTTGAACATTATAACCCTGCATTGAATTATTATTTGATGTTGGAAGGAAATATTGGAAATGAAAATGGTCCTCTATATCTGAAACTTGCTAAATGTTACATGTCCTTGAAAGAAAGTTCTCAAGCAATTATTTTTTTTTACAAAGCCCTTGAAATACTACAAGATGACGTTGATGCACGTATAGCTCTAGCTTCCCTTCTGCTTGAAGAGGGAAAAGAAGATGAAGCAATTTCCTTGTTGTCTCCTCCAAATGATTCTGACTCTGGTGAAGTACATTCTGAAAAGTCAAATAGATGGTGGGTTGATATAAGAATAAAACTGAAGCTCTGCAGCATTTATTGGAATAGAGGGACACTTGGTGATTTTGTGGATACAATTTTCCCTTTGGTTCGTGAATCAGATGTTGCAACATCAGATGTTGCAACTCTTCGACATAAGGGTAAATCAAAAAAGCGACTCACCAAAAGAGATCTGGTCGAAAGGGTTAGGATACTAGATGGTCCAGAAAAGGATAATGTATTTCGAGGATTCAGGACAGTAGCTGCAGCATCTGACCGGTTGAAAGCTTCTAGGGCAAAAAAGTTGCTGCAGAAGATGGCAATTGAAAAGGAGAAAAGAAAAGCTGAGGCACTGGCCTCCGGAATTGATTGGCTAAGTGATGATTCAGATGATGAGCCTCAGAAAGAAAACAGAGAACCTCCCTTGTGCAATCTTCTCAAAAATGAAGAACATCACCAGCTAATAATCGATTTGTGCAAGGCATTAGCATCCTTACAAAGGTATTGGGAAGCACTGGAGATTATTAATCTCTCTCTAAGATTGGCTGGTACATCTCTGTCTACTGACAAGAAAGAGGAACTTCGATCTCTTGGAGCTCAAATGGCATACAGCACAACGGATCCTAAACATGGGTTTGATTGTGTAAAATACATTGTTCAGCAACATCCACACAGTGTTGCAGCTTGGAATTGCTACTACAAGGTTATCTCAAGATTGGAAAACCGAGACACAAGACATTATAAATTTGTACGTTTTATGCAAGGAAAGTTTGTGGACTGTGTGCCTCCTATTCTAATTTCTGGGCATCAGTTTACCATATTTAGCCATCATCAAGATGCAGCAAGGAAATACCTTGAAGCTTACAAACTATTGCCAGAGAATCCCTTGGTTAATCTCTGCGTTGGAACAGCGTTGATCAACTTAGCATTGGGTTTCAGACTTCAAAACAAGCATCAATGTCTTGTACAAGGTTTAGCATTCCTCTACAATAACCTAAGAATCTGCGAGAACAGCCAGGAATCCTTGTACAACATAGCTCGGGCCTATCATCATGTTGGCCTTGTAACTCTGGCGGCAGTCTATTATGAGAAAGTGATTGGTATTCGCGAGAAAGACTATCCAATTCCAAAGCTTCCCAATGAGAATCCAGATGTCATCGAAAATCATAAACCTGGTTACTGCGACCTTCGCAGAGAGGCAGCTTACAATTTGCATTTAATCTACAAAAAAAGTGGTGCTATTGATCTTGCTAGGCAAGTTCTCAGAGATCATTGTACCTTGTGA 2766 0.4074 MAKEGNDIDEVNDAVHGTGEQEEEEEHAAQEEDDNDIEEEDEYTFRFENGMNPLDFIDNNDDSGLQPYERFERLEQEALADKKRKATECHSEEPPSKMSRESDISGSKIAEIMEAMNYHGVRKRSRKPKKRGRRKGSKNKMDPRLTRMLGDATLHYACGHYDKAKAVLLEVIKLAPNLPDSYHTLGLVCSSLQDYKRAMSFYLIAAHLTPKDSSLWKRIFTWSIEQGYIDQARHCLLRAITADPKDVTLRGLLARLYVELGDYQKAAVTYEQVHQLCYENVDPLKAAAKLYKKCGQVEHAVRILEDYLKSQPDGANASVVDLLCTILMETKAHDSALQYIEHAQAVNAWKELPLNLKIKAGICHAHLGKMDMAQVLLNDLKPENASKHVDLVIEVADSLMGLEHYNPALNYYLMLEGNIGNENGPLYLKLAKCYMSLKESSQAIIFFYKALEILQDDVDARIALASLLLEEGKEDEAISLLSPPNDSDSGEVHSEKSNRWWVDIRIKLKLCSIYWNRGTLGDFVDTIFPLVRESDVATSDVATLRHKGKSKKRLTKRDLVERVRILDGPEKDNVFRGFRTVAAASDRLKASRAKKLLQKMAIEKEKRKAEALASGIDWLSDDSDDEPQKENREPPLCNLLKNEEHHQLIIDLCKALASLQRYWEALEIINLSLRLAGTSLSTDKKEELRSLGAQMAYSTTDPKHGFDCVKYIVQQHPHSVAAWNCYYKVISRLENRDTRHYKFVRFMQGKFVDCVPPILISGHQFTIFSHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGFRLQNKHQCLVQGLAFLYNNLRICENSQESLYNIARAYHHVGLVTLAAVYYEKVIGIREKDYPIPKLPNENPDVIENHKPGYCDLRREAAYNLHLIYKKSGAIDLARQVLRDHCTL 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00355 921 Gene3D Tetratricopeptide repeat domain 350 518 IPR011990 GO:0005515
Phco9g00355 921 Gene3D Tetratricopeptide repeat domain 137 349 IPR011990 GO:0005515
Phco9g00355 921 MobiDBLite consensus disorder prediction 122 138 - -
Phco9g00355 921 Pfam Tetratricopeptide repeat 225 272 - -
Phco9g00355 921 Pfam Tetratricopeptide repeat 152 212 - -
Phco9g00355 921 SUPERFAMILY TPR-like 157 480 IPR011990 GO:0005515
Phco9g00355 921 PANTHER TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED 14 921 IPR039340 GO:0006383
Phco9g00355 921 MobiDBLite consensus disorder prediction 117 143 - -
Phco9g00355 921 ProSiteProfiles TPR repeat profile. 424 457 IPR019734 GO:0005515
Phco9g00355 921 ProSiteProfiles TPR repeat profile. 179 212 IPR019734 GO:0005515
Phco9g00355 921 Pfam Tetratricopeptide repeat 425 453 IPR019734 GO:0005515
Phco9g00355 921 Pfam Tetratricopeptide repeat 834 866 IPR019734 GO:0005515
Phco9g00355 921 Gene3D Tetratricopeptide repeat domain 580 920 IPR011990 GO:0005515
Phco9g00355 921 SUPERFAMILY TPR-like 388 725 IPR011990 GO:0005515
Phco9g00355 921 FunFam General transcription factor 3C polypeptide 3 552 920 - -
Phco9g00355 921 SUPERFAMILY TPR-like 762 916 IPR011990 GO:0005515
Phco9g00355 921 MobiDBLite consensus disorder prediction 65 99 - -
Phco9g00355 921 MobiDBLite consensus disorder prediction 1 23 - -
Phco9g00355 921 MobiDBLite consensus disorder prediction 24 43 - -
Phco9g00355 921 Coils Coil 20 41 - -
Phco9g00355 921 SMART tpr_5 833 866 IPR019734 GO:0005515
Phco9g00355 921 SMART tpr_5 646 679 IPR019734 GO:0005515
Phco9g00355 921 SMART tpr_5 247 280 IPR019734 GO:0005515
Phco9g00355 921 SMART tpr_5 179 212 IPR019734 GO:0005515
Phco9g00355 921 SMART tpr_5 424 457 IPR019734 GO:0005515
Phco9g00355 921 SMART tpr_5 145 178 IPR019734 GO:0005515
Phco9g00355 921 FunFam General transcription factor 3C polypeptide 3 isoform A 108 352 - -
Phco9g00355 921 MobiDBLite consensus disorder prediction 1 104 - -