Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00352 ATGGTCCTCCTGACATCACATTGCCAGCTAGCCCAATCGGAGCGTTCCCTTCTCCGGCGATTCCATGTTCCGTTTCTAGGGTTTGCTTTCTCCGATCGCCGCTCCGCACTCGCTGAGATGTCGCGCCAGGCCACGACCCCGGCCTTCACTAAATCGAAGACGCTCGACAATAAATATATGCTGGGAGATGAGATTGGGAAAGGAGCTTATGGTCGAGTTTACAAAGGTTTGGACCTGGAGAATGGAGATTTTGTTGCCATTAAACAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTCAACATCATCATGCAAGAGATTGATTTGTTAAAGAATCTGAACCACAAAAATATTGTAAAGTATCTTGGATCTTCTAAGACAAAAAGTCACCTGCACATAGTTCTTGAGTATGTAGAGAATGGCTCACTTGCAAATATTATCAAGCCAAATAAATTTGGCCCTTTTCCGGAATCATTGGTTGCATTATATATAGCCCAGGTGTTGGAAGGTTTGGTTTATCTTCATGAACAAGGTGTTATCCATCGGGATATTAAGGGTGCAAACATACTGACAACTAAGGAGGGTCTTGTGAAACTAGCTGATTTTGGTGTTGCTACAAAACTAACAGAGGCTGATGTTAACACTCATTCAGTTGTTGGAACACCTTACTGGATGGCCCCAGAGGTTATAGAAATGGCTGGGGTTTGTGCAGCTTCTGACATTTGGAGTGTTGGCTGTACAGTGATTGAGCTTCTTACATGTGTACCTCCTTATTATGATTTGCAGCCTATGCCAGCTCTTTTCCGTATTGTCCAGGATGAGCATCCGCCAATTCCAGACAGCCTTTCACCTGATATTACTGATTTTCTGCTTCAATGCTTTAAGAAGGACTCTAGACAAAGGCCTGATGCTAAAACTCTGCTGTCTCACCCCTGGATTCAAAACTTTAGACGTGTTCTGCAGTCTTCTCTTCGTCATAGTGGAACACTAAGAAATATAGAGGAAGATGATTCTGCAGATGCAGAAGTTTCTGGTGGTTATCATAAGAGTGCTTACGAAGGCTCTTCTGTGGAGAAAGAGGACTCTTCAAAAGAGCTTTCGTCTGGGGCTGCTCATGGCAGCAAATCTCATGAAGACAATGCTTCAGTTCCCAATGAAAGAACAGAGAAAGCAGATCATGTTCCATCAGATCAGGTTCTTACCTTAGCCATTCGTGAGAAGTCATTTCTACAAACTGGTTCTAGCAAACTCTCTCCTAATAGAGAAGGTGGTAATTCTGAGCCTATTGGCGATCACGAAATTTCAAATGCTAAAGACCTCCATGAAGTTATGATGAATGGAGAGGTTGGATCACCACAATCAAGAGTAATGGCTAGTAAGACTGAAGGAAAAGACAGTTCTGTAAACAATGGTAACAAATCATTTGCTTTTGGGCCAAGAGGTCAGGATAATGGTTCCCTCAAGGCAATGAAGATGCCAACCACTGTGGAAGGAAATGAGCTGAGTAGATTTAGTGACCCACCAGGAGATGCCTACTTAGATGATTTATTCCATGCATTGGATAAACAACCTGGGGAGGTTGCAACAGAGGCATCCACATCTACATCCACTTCTCATATGGTTAAAGGTAACACATCTAGAATTGATGGTGGGAAAAATGACCTGGCTAAAGAGTTGAGAGCCACAATTGCTCGAAAGCAGTGGGAGAAGGAAAGTGAAATTGGACAGGCAAACAATGGTGGGAATCTTTTGCATCGAGTTATGATAGGTGTTCTAAAAGATGACGTGATAGATATAGATGGTTTGGTCTTCGATGAAAAACTTCCGGGAGAGAACCTTTTTCCTTTGCAGGCTGTTGAGTTCAGCAAACTAGTTGGTTCATTAAAACCAGAGGAATCAGAAGATGTGATTGTGTCTGCATGTCAGAAACTTATTGGTATATTTAACCAACGCCCAGAGCAGAAGATTGTTTTTGTTACCCAGCATGGTTTACTTCCTCTAACAGATTTGCTAGAAGTTCCTAAAACACGTGTTATATGTTCTGTGCTTCAGCTTATAAATCAAATAGTTAAAGACAACACTGATTTTCTAGAAAATGCATGTCTTGTTGGATTGATTCCTGCAGTCACAAGCTTTGCAGTACCTGATCGTCCCAGAGAGATACGTATGGAAGCAGCTTATTTTTTACAGCAGCTATGTCAGTCAAGTTCTTTGACATTACAAATGTTTATCGCTTGCCGAGGAATACCAGTTTTAGTGGGATTTCTTGAGGCCGATTATGCCAAGTACAGGGAGATGGTTCATCTGGCTATTGATGGCATGTGGCAGGTATTTAAGCTTCAGCAGTCAACTCCTAGAAATGATTTTTGCCGGATAGCTGCTAAGAATGGAATACTTCTCAGGCTTATAAATACTCTTTATAGCTTAAATGAGTCAACTCGACTAGCTTCTAGCTCTGCTGGGGGTGGATTTTCAATTGATGGTTCGGCTCAACGCCCACGGTCTGGTATCTTGGATCCTACACACCCTTATATTAATCAGAATGAGGCATTTCTATCTTCAGCAGACCAGCAAGATCCTCCTAAATTGAGACGTGGAGTACTTGATCATCACTTAGAACCGTCACATCCTTCATCCTCCAATCCTCGAAGATCAGATGCTAACCACTCCATGGATGATGGTCTGTCACAGGAGAAGAATTCAACTCAAACACCCAGAGAATCTTCCGCAGGTGCATTGAAAGAGCGAGCAGATGTTGAATCCAGACAACGTATTTCTACTAACAGGACATCAACTGATAGGCCACCAAAATCAACAGAACCATCATCAAATGGGTTATCAGTGACAGGAGCTACACACCAGGAACAAGTTAGGCCTCTTCTTAGCTTGTTGGACAAAGAGCCACCATCTGGACGCTTTTCTGGGCAACTAGAGTATGTACGTCAGTTTTCAGGATTAGAAAGACATGAAAGTGTACTCCCTTTGTTACATGGCTCAGAAAAAAAAACGAATGGTGAACTAGACTTCTTGATGGCAGAATTTGCAGATGTTTCTCAACGCGGAAGGGAAAACGGAAATCTTGACTCCAGTGCTAGAGTTTCTCATAAAATCACTCCCAAGAAATTGGGGACTTTGAGTTCCAGTGAAGGAGCTGCTTCCACATCTGGGATCGCTTCACAGACAGCATCAGGTGTCCTGTCTGGTTCAGGTGTTCTAAATGCTAGACCAGGTAGTGCTACTTCGTCTGGGCTACTTTCCCACATGGTTTCATCACTGAATGCAGAAGTTGCCAGAGAATATCTGGAGAAAGTAGCTGATCTTCTGCTTGAGTTTGCGCAAGCAGACACAACAGTGAAATCTTATATGTGTAGCCAAAGCTTGCTCAGTCGTCTTTTCCAGATGTTTAATAGGGTGGAGCCTCCTATTTTGTTGAAGATACTGAAGTGTATTAATCATCTGTCAACTGATCCGAATTGCTTAGAAAATCTTCAGCGTGCTGAAGCAATAAAATACTTGATACCAAATCTTGAACTCAAAGAAGGGTCTCTTGTATCAGAGATACATCACGAGGTCTTGAATGCGCTATTCAATTTATGCAAGATAAATAAGAGAAGACAAGAACAAGCAGCTGAAAATGGAATCATTCCCCATTTGATGCAATTCATCACATCCAATTCTCTCTTGAAGCAGTATGCTTTGCCTCTTCTATGTGACATGGCTCATGCATCTCGCAATTCAAGGGAGCAATTAAGGGCTCATGGTGGTTTGGATGTCTATTTGAACCTTCTCGATGATGAGCTTTGGTCTGTGACAGCATTAGACTCTATTGCTGTCTGTTTAGCCCATGACAACGATAATAGAAAGGTTGAACAAGCATTGCTGAAAAAGGATGCAGTTCAGAAGCTTGTGAAGTTTTTCCAGTCCTGTCCAGAGCGGCATTTTGTACACATATTGGAGCCATTCCTGAAAATTATCACAAAATCTTCAAGGATTAATACCACATTGGCTGTTAATGGGTTAACGCCATTGCTCATTGCAAGGCTAGATCATCAGGATGCTATAGCTCGTCTTAATTTACTCAGGCTAATAAAGGCCGTTTATGAGCATCACCCTCAGCCGAAGAAGTTGATTGTGGAGAATGATCTACCTGAAAAGCTTCAAAACTTAATAGGGGAACGGAGAGATGGACAAGTGTTGGTTAAACAGATGGCTACCTCATTACTTAAAGCACTACACATAAATACCGTTTTGTAA 4254 0.4217 MVLLTSHCQLAQSERSLLRRFHVPFLGFAFSDRRSALAEMSRQATTPAFTKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSSKTKSHLHIVLEYVENGSLANIIKPNKFGPFPESLVALYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMAGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLLQCFKKDSRQRPDAKTLLSHPWIQNFRRVLQSSLRHSGTLRNIEEDDSADAEVSGGYHKSAYEGSSVEKEDSSKELSSGAAHGSKSHEDNASVPNERTEKADHVPSDQVLTLAIREKSFLQTGSSKLSPNREGGNSEPIGDHEISNAKDLHEVMMNGEVGSPQSRVMASKTEGKDSSVNNGNKSFAFGPRGQDNGSLKAMKMPTTVEGNELSRFSDPPGDAYLDDLFHALDKQPGEVATEASTSTSTSHMVKGNTSRIDGGKNDLAKELRATIARKQWEKESEIGQANNGGNLLHRVMIGVLKDDVIDIDGLVFDEKLPGENLFPLQAVEFSKLVGSLKPEESEDVIVSACQKLIGIFNQRPEQKIVFVTQHGLLPLTDLLEVPKTRVICSVLQLINQIVKDNTDFLENACLVGLIPAVTSFAVPDRPREIRMEAAYFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQQSTPRNDFCRIAAKNGILLRLINTLYSLNESTRLASSSAGGGFSIDGSAQRPRSGILDPTHPYINQNEAFLSSADQQDPPKLRRGVLDHHLEPSHPSSSNPRRSDANHSMDDGLSQEKNSTQTPRESSAGALKERADVESRQRISTNRTSTDRPPKSTEPSSNGLSVTGATHQEQVRPLLSLLDKEPPSGRFSGQLEYVRQFSGLERHESVLPLLHGSEKKTNGELDFLMAEFADVSQRGRENGNLDSSARVSHKITPKKLGTLSSSEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNAEVAREYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPPILLKILKCINHLSTDPNCLENLQRAEAIKYLIPNLELKEGSLVSEIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMQFITSNSLLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLDDELWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQSCPERHFVHILEPFLKIITKSSRINTTLAVNGLTPLLIARLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPEKLQNLIGERRDGQVLVKQMATSLLKALHINTVL 1417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00352 1417 CDD STKc_Cdc7_like 58 313 - -
Phco9g00352 1417 MobiDBLite consensus disorder prediction 453 479 - -
Phco9g00352 1417 FunFam MAP3K epsilon protein kinase 1 615 829 - -
Phco9g00352 1417 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Phco9g00352 1417 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Phco9g00352 1417 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Phco9g00352 1417 PRINTS Tyrosine kinase catalytic domain signature 239 261 IPR001245 GO:0004672|GO:0006468
Phco9g00352 1417 MobiDBLite consensus disorder prediction 868 950 - -
Phco9g00352 1417 SMART arm_5 1156 1200 IPR000225 GO:0005515
Phco9g00352 1417 SMART arm_5 1202 1241 IPR000225 GO:0005515
Phco9g00352 1417 SMART arm_5 651 691 IPR000225 GO:0005515
Phco9g00352 1417 ProSitePatterns Protein kinases ATP-binding region signature. 65 88 IPR017441 GO:0005524
Phco9g00352 1417 SMART serkin_6 59 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00352 1417 MobiDBLite consensus disorder prediction 528 552 - -
Phco9g00352 1417 MobiDBLite consensus disorder prediction 379 394 - -
Phco9g00352 1417 FunFam MAP3K epsilon protein kinase 1-like 1071 1412 - -
Phco9g00352 1417 SUPERFAMILY Protein kinase-like (PK-like) 56 322 IPR011009 -
Phco9g00352 1417 MobiDBLite consensus disorder prediction 453 487 - -
Phco9g00352 1417 FunFam MAP3K epsilon protein kinase 1 56 345 - -
Phco9g00352 1417 Gene3D - 613 820 IPR011989 -
Phco9g00352 1417 MobiDBLite consensus disorder prediction 410 432 - -
Phco9g00352 1417 MobiDBLite consensus disorder prediction 894 909 - -
Phco9g00352 1417 Gene3D Transferase(Phosphotransferase) domain 1 56 345 - -
Phco9g00352 1417 MobiDBLite consensus disorder prediction 528 544 - -
Phco9g00352 1417 MobiDBLite consensus disorder prediction 331 396 - -
Phco9g00352 1417 SUPERFAMILY ARM repeat 623 1309 IPR016024 -
Phco9g00352 1417 MobiDBLite consensus disorder prediction 924 950 - -
Phco9g00352 1417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Phco9g00352 1417 ProSiteProfiles Protein kinase domain profile. 59 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00352 1417 SUPERFAMILY ARM repeat 1286 1408 IPR016024 -
Phco9g00352 1417 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 55 765 - -
Phco9g00352 1417 Pfam Protein kinase domain 60 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00352 1417 Gene3D - 1070 1415 IPR011989 -
Phco9g00352 1417 MobiDBLite consensus disorder prediction 818 843 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00352 Phco-Chr9 2450470 2468793 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Phco9g00352 Pkinase 3.7e-72 CL0016