Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00347 ATGAACATGAAGAACCTGAACATCTCTTTGTGCGTGCTTCTCATAGCTCTTGTCCGCATAGGGGGCAGTGCACCCTCAAGCTTCAACTATGGTGATGCCCTTGACAAGAGTTTGATGTTCTTTGAAGCACAGAGATCTGGTAAGCTACCACTACAGCAGCAGCGAGTCAATTGGCGTGGTGATTCTGGCCTTCAAGATGGTTTTCAGCAAGGAGTAGACCTGGTTGGAGGGTACTATGATGCAGGAGATCATGTGAAGTTTGGGTTGCCAATGGCCTACAGTGTCACAATGCTTGCATGGGGAGCCATTGAGTTCAACAAGGAAATTACGAACTTGAACCAAATGGGACACGCATTATGGGCCATTAAATGGGGAACTGATTACTTTGTCAAAGCACACACTCAACCCAATGTTCTTTGGGGACAGGTGGGAGATGGAGTTTCTGATCATTACTGCTGGGAGCGTGCTGAAGACATGACTACATCAAGAGGTGCCTATAAAATTGATGAACAACACCCTGGCTCTGATCTGGCAGGTGAAACTGCAGCTTCATTGGCTGCTGCAGCTATGGCTTTCAGGCCCTACAACTCTTCTTACTCTGATCTCCTGCTAGTTCATGCAAAACAGCTCTTCACATTCGCAGATAGGTTCAGAGGTCTCTATGATGACTCCATTTCAAGTGCTCAGCAATTCTATACTTCTTCCGGTTACTCAGATGAATTGTTATGGGCTGCCACTTGGCTACACCTTGCAACTGGAGATGAATACTACCTAAAGTATGTAGTGGACAATAGTGTGTATATGGGTGGAACTGGCTGGGCAATGAAAGAGTTCTCTTGGGACAACAAATATGCTGGTGTGCAGATCCTCCTAACAAAGATATTAATAGAAGGGAAGGCTGGTTCTTACGCTGATACACTAAAGCAATACCAGGCCAAGGCAGATTATTTTTCATGTGCCTGCTTGCAAAAGAATGATGGTTACAATGTTCAGAAAACACCAGGTGGCTTACTATACGTGCGTGAATGGAACAATATGCAGTATGTTTCTTCTGCTACATTCCTTATAGCTGTTTACTCTAATTACCTCTCGGCAACAAAAGCAAATCTCAACTGTCCAGATGGACAAACTCAGCCTCAGGAGCTCCTCAACTTTGTCAAGTCTCAGGCTGATTATATCCTTGGTAATAACCCAGCGGATATGAGCTACTTGGTTGGATATGGAGCAAAATATCCTCTTCATGTTCACCACAGAGGCGCTTCCGTTGCTTCAATCTTTGCTCTTCACAATGAGGTTGGCTGCGCTCAAGGATTTGAGCTGTGGTATAACCGTGCTGAGCCAAATCCTAATGTCATCGATGGTGCCCTTGTGGGTGGTCCCGATAAAAATGATGGCTTCTCTGATGACAGATCCAACTATGAACAAACTGAGCCTACACTTTCAGGTTCTGCTCCTCTTGTGGGCATCTTTGCTAAACTGCAGAGTTTGTGTGGTAATGTAGGTGAAGGTTACAACCATAATGAATCACCAGTGCCCCAGCAAAAAACACCAACCTCATCAGTTTTCTCATATTTGTCAGGTTACAACCATAATGAATTATCAGTGCCCCAACAAAAAACACAAAGTTACGACCAAAATGAATCACCAGTGCCCCAACCAAAAACACCGAGTACATACACAGTAAAAGAAACGGCATCTAAAACCTCAGAAGGTGCCCCATTGCAATTTCTTCACTCAATAAGTAGCTCATGGACTGTTGGAGGTGCAACCTACTACCGTCACAGGGTCATAATCAAGAATACTTCTTCGAAGCCGATCTCAGATCTTAAGTTGGTGGTTAAGGACCTCTCAGGCTCTTTATGGGGTCTCTCTCCAACAGAGGAAAAGGACACCTATGAACTTCCCCAATGGCAGAAGGTCTTGAATCCTGGCTCCGAGTGCATATTTGTATATGTTCAAGGCGGACCCCAGGCTAAAGTCTCCATCAAAACCTTCCAATGA 2001 0.4483 MNMKNLNISLCVLLIALVRIGGSAPSSFNYGDALDKSLMFFEAQRSGKLPLQQQRVNWRGDSGLQDGFQQGVDLVGGYYDAGDHVKFGLPMAYSVTMLAWGAIEFNKEITNLNQMGHALWAIKWGTDYFVKAHTQPNVLWGQVGDGVSDHYCWERAEDMTTSRGAYKIDEQHPGSDLAGETAASLAAAAMAFRPYNSSYSDLLLVHAKQLFTFADRFRGLYDDSISSAQQFYTSSGYSDELLWAATWLHLATGDEYYLKYVVDNSVYMGGTGWAMKEFSWDNKYAGVQILLTKILIEGKAGSYADTLKQYQAKADYFSCACLQKNDGYNVQKTPGGLLYVREWNNMQYVSSATFLIAVYSNYLSATKANLNCPDGQTQPQELLNFVKSQADYILGNNPADMSYLVGYGAKYPLHVHHRGASVASIFALHNEVGCAQGFELWYNRAEPNPNVIDGALVGGPDKNDGFSDDRSNYEQTEPTLSGSAPLVGIFAKLQSLCGNVGEGYNHNESPVPQQKTPTSSVFSYLSGYNHNELSVPQQKTQSYDQNESPVPQPKTPSTYTVKETASKTSEGAPLQFLHSISSSWTVGGATYYRHRVIIKNTSSKPISDLKLVVKDLSGSLWGLSPTEEKDTYELPQWQKVLNPGSECIFVYVQGGPQAKVSIKTFQ 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00347 666 Gene3D - 26 497 IPR012341 GO:0005975
Phco9g00347 666 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 392 418 IPR018221 -
Phco9g00347 666 MobiDBLite consensus disorder prediction 534 565 - -
Phco9g00347 666 SMART CBM49_2 574 654 IPR019028 GO:0030246
Phco9g00347 666 FunFam Endoglucanase 26 498 - -
Phco9g00347 666 SUPERFAMILY Six-hairpin glycosidases 27 498 IPR008928 GO:0005975
Phco9g00347 666 PANTHER ENDO-1,4-BETA-GLUCANASE 10 495 - -
Phco9g00347 666 MobiDBLite consensus disorder prediction 454 480 - -
Phco9g00347 666 Pfam Carbohydrate binding domain CBM49 575 653 IPR019028 GO:0030246
Phco9g00347 666 Pfam Glycosyl hydrolase family 9 30 489 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00347 Phco-Chr9 2401671 2405827 Dispersed/Transposed