Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00343 ATGAAACTTTCCTTGTGGAACAAATCAAGAATAAGTACATATACAAATAAGGAAAAACCCTTTATTCACACCAATGCAAAACTAAATCAAAATGCACACACATTCAACAATCTAGCTAGAGTGTGCATGAGCAGTGCTGCAATGATCGAGAAAGAAATGGTAGAGGGAGAAGTGTCAGAGTTTGATGAGACAACGATAAGAGCTCAAAGAGCTGCAAGGGGTGGAAACTGGAGAATGTTCAAGAAAATCTTGGAGGAAGACACCAAGAGTTTGCTGGGGGCTTTTGACTTGTTTGGGAACACTGCCATTCACATTGCAACACGTTCCAACAATCCAGGGCTTCTTCGTGAGTTGTTGGAAATGCTGAGTGAGGAAGAGAGGTGGTATGCATTGAGGAAGGGGAATTGTGTGAATAACACCCTTCTGCATGAGATCGTCTTCTGTACTACGGTGGAGATGGCTGGTGTTGTGTTTAAGTTTGAGAATGAGGCAGCACCAGAAGACGTACCAGAAGAAAAGAAAAGGCTTCCTTTGGTGGAGATCGTAAATGACTCAGGTGAAACCCCTCTCTTTAGGGCTGCCAAGCTTGGCAGGCTTAAGATGCTCAAGTATATGGCCAAACATGCTCATGGTGACATGAGAAGGCTTTTTGTTAGATATGACAAACATTCCATTCTTCACGCAAGCATTCTTGGACAGTTTTTTGATGTCGGTATTTGGTTGTTGAATATGGATGAAAAGCTAGCTCAACACAAGGATATGAATGGAATGACATGTCTTCAACTTCTATCCAATATGCCACTTGTATTTCGGAGCCAAGCACCTTCCATGGGAACATTGAAGACTCTTATATATTACTTGCTTCCTGAGGAAGGATATGGAAGCCATGATGATGGTGAAAATGGCAGTGTTGACTTCAGACATCAGAGGAGCGATATAGAAAGTGGCCAACAAGATAAGGCCAAGTTTCCTAGTTCAGTTCTTTCAAGGATCAACTATGCTATTTGGAGAACTCTGGCTAAAGAGTTCGATGGGATTGGACGTATATGGAAACTAAAGAAGCAGCATAAGCTAGCAGAGCATCTGTCTGAGATATTAGTGCAGAAAGACTTTTCATGGCAGGATTCGTTTCACAAAAACTTTCAACCCTTGATTGTATTGCCAGTTCTTTCCTCCAAATCAGACAGGATAAAACACATTCACCACATGAAGGAGATGCACAAGACCAATAGTGAAATGTCGCGTTCTAGAAGTTACAGACCTATAACCACCTCAACAAGTATTCCCCATTCTAAGAGCTACACGCCACTTCTCATGGCAGCTGGCTCAGGAATCGTGGAAATCGTTGGGAAAATCATTGACAAATTTCCCGAGGCCATTTGTCACGTTAGCCAGGATGAACACAACGTTCTGCACATGGCTGTGAAGCACCGTCAGCTGAAAATCTTTAACTTGTTAAAGAAACATTCAGCATTCAAATCATTGACATTCCGGATTACTGCAGAAGGTCGTACTCTCTTGCACCAAATTTCGAGAATGGAGTTTTACGTAGAACAGCACCTACCTGGTGTTGCATTCCAACTCCAAGACGAGTTGCGCTGGTACGAACGAGTGAAGAAGATTGTTCCAGCATACTACCTGATGCACTGTGACAAAGACGGGCTAACAGCTGAAGATGTTTTGGAAATGGAGCACCGGGAGATGCACAAAGAAGCAAAAGGGTGGATTAAGGAAACGGCACAGTCATGCTCAACCGTGGCTGTCCTTGTTGCCACGGTGGTCTTTGCGGCGGCCTACACCATCCCGGGTGGCACTAATCAGAACAATGGCACGCCTGTGTTTCTTGGTTCGCGCGTGTTTCTCTTCTTCACTGTGGCGGATGTTGTGGCACTGGTGAGCTCACTGGCATCAGTGGTGATGTTTCTCTCAATCCTAACATCCCCTTTTGAGTTGTGGGATTTCCGAAGGTCTCTGCCGCAAAAACTGAGCTTAGGGTTTGCTTCTCTCTTCTTCTCGTTGGTGTGCACCATGCTGACATTCAGTGCAACAGTTTTGCTGACCATTCAGTTGGAGAATAATCACCAGAAATGGGCTTCCGTTTTGTTTTGCTGCGGTGTGTTCTTTCCTGTGGCCATTTTTTGGCGAATGCAATTTCCACTTTACAAGATGCTTCAGCGTCTCGCCAAGCGCCTGTTGAAGACGCTTAGACAAGCAGTGCCAACTACGTTTGTCAAATATTCCAGGAAAAGAGCTCAGACAAGAAACTATAACATTATCATTCACTAG 2286 0.4418 MKLSLWNKSRISTYTNKEKPFIHTNAKLNQNAHTFNNLARVCMSSAAMIEKEMVEGEVSEFDETTIRAQRAARGGNWRMFKKILEEDTKSLLGAFDLFGNTAIHIATRSNNPGLLRELLEMLSEEERWYALRKGNCVNNTLLHEIVFCTTVEMAGVVFKFENEAAPEDVPEEKKRLPLVEIVNDSGETPLFRAAKLGRLKMLKYMAKHAHGDMRRLFVRYDKHSILHASILGQFFDVGIWLLNMDEKLAQHKDMNGMTCLQLLSNMPLVFRSQAPSMGTLKTLIYYLLPEEGYGSHDDGENGSVDFRHQRSDIESGQQDKAKFPSSVLSRINYAIWRTLAKEFDGIGRIWKLKKQHKLAEHLSEILVQKDFSWQDSFHKNFQPLIVLPVLSSKSDRIKHIHHMKEMHKTNSEMSRSRSYRPITTSTSIPHSKSYTPLLMAAGSGIVEIVGKIIDKFPEAICHVSQDEHNVLHMAVKHRQLKIFNLLKKHSAFKSLTFRITAEGRTLLHQISRMEFYVEQHLPGVAFQLQDELRWYERVKKIVPAYYLMHCDKDGLTAEDVLEMEHREMHKEAKGWIKETAQSCSTVAVLVATVVFAAAYTIPGGTNQNNGTPVFLGSRVFLFFTVADVVALVSSLASVVMFLSILTSPFELWDFRRSLPQKLSLGFASLFFSLVCTMLTFSATVLLTIQLENNHQKWASVLFCCGVFFPVAIFWRMQFPLYKMLQRLAKRLLKTLRQAVPTTFVKYSRKRAQTRNYNIIIH 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00343 761 Gene3D - 399 526 IPR036770 -
Phco9g00343 761 Pfam Domain of unknown function 574 685 IPR026961 -
Phco9g00343 761 PANTHER CASKIN 100 723 - -
Phco9g00343 761 SUPERFAMILY Ankyrin repeat 70 263 IPR036770 -
Phco9g00343 761 SMART ANK_2a 98 127 IPR002110 GO:0005515
Phco9g00343 761 SMART ANK_2a 466 497 IPR002110 GO:0005515
Phco9g00343 761 SMART ANK_2a 432 463 IPR002110 GO:0005515
Phco9g00343 761 SMART ANK_2a 185 215 IPR002110 GO:0005515
Phco9g00343 761 MobiDBLite consensus disorder prediction 406 425 - -
Phco9g00343 761 FunFam Uncharacterized protein 399 527 - -
Phco9g00343 761 Gene3D - 44 286 IPR036770 -
Phco9g00343 761 SUPERFAMILY Ankyrin repeat 424 510 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00343 Phco-Chr9 2383533 2387042 Dispersed/Transposed