Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00330 ATGGCACTCATATTCTGGATCCTGTTCATTTCCTTCCTCACTAACACGGTTGTCGGAGACGACGAGACAATGCAGCAGGGGGATCGAGTAAAAAATTTGCCCGGACAACCACCAGTGAATTTCAATCACTATGCAGGTTATATCAAGTTAAAACCAAACCAAGAAAAAGCATTATTTTACTGGTTTTTTGAAGCTGAAGATGCTCCATCCCGTAAACCTCTTGTACTTTGGCTTAATGGAGGACCTGGTTGCTCCTCTGTTGCATTTGGGGCAGCACAAGAGATTGGTCCATTTTTGGTAGACCAGGAAGAGCATCTAAAATTTAACAAATTTTCTTGGAATAAAGTTGCAAACATCATAATTCTGGACTCACCCATTGGTGTTGGCTTTTCTTACACTAACAATTCCAAGGACTTAAGTGAGCTTGGTGATGAAGTTTCAGCTTCTGATAACTACGCTTTTTTGGTTGGTTGGTTTAAAAGATTTCCAAACTTCAGATCCAACGAATTTTATATTGTAGGAGAGAGTTATGGAGGACATTACGCTCCACAACTTGCTGATCTTATATATGAAGGAAATAAAATAGGTCCTTACATCAATTTGAAGGGATTGATGATGGGAAATGCTGTGATAAATACTATTACAGATCTAAAAGGGTTATTTGATTTTGCCTTTAGCCATGCAATAATCTCAACAGAAGTGTTCCATGGAATAAAAAAGCACTGTGATTTCAGTGAAAAGAGACGCACCAGAGATTACACCAGAGATTGCCAACTTAATATTGAAAAATTTTTAGAATCTTATACGAATATTGACATTTTCAATATTTACTCACCTATTTGTATGAAAGATTATGAAAGACCAAATTCAACAAGACCTATTGTTGTTCCCTATGCTCTCACCCAACATGTTCTTTGGAATACATTACCATCATCAGGATATGATTATTGTCCAGAAGATCATGTAAGAATGTATTTCAACAAGAAGAATGTTCAGAGGGCCATCCATGCAAATACCACTAACTTGCCTTATCCATTTACCGTTTGCAGCGGTATAATTCAGAAATGGAATGACTCTCCAACCACAGTGCTGCCACTAATTCAGAAACTCTTAAGTGTTGGTTTACGTATTTGGATGTACAGTGGAGACATTGATGGTAGAGTTCCAATACTATCAACTAGATATAGTTTGGAAGAGTTGAAACTAAATGTAACCAACGAATGGAGAGCTTGGTTTGAAGGGAAAGAAGTGGCAGGGTGGGTGGAGGAGTATGAGGGTGGTCTTACTTTTGCCTCAGTTAGAGGTGCTGGCCACCAAGTTCCAGTTTCTGCACCACAACAAGCACTTTCTCTTTTCTCCCATTTCCTCTCTTCTCAACCTCTTCCATCCTCTCGCTTCTAG 1401 0.3883 MALIFWILFISFLTNTVVGDDETMQQGDRVKNLPGQPPVNFNHYAGYIKLKPNQEKALFYWFFEAEDAPSRKPLVLWLNGGPGCSSVAFGAAQEIGPFLVDQEEHLKFNKFSWNKVANIIILDSPIGVGFSYTNNSKDLSELGDEVSASDNYAFLVGWFKRFPNFRSNEFYIVGESYGGHYAPQLADLIYEGNKIGPYINLKGLMMGNAVINTITDLKGLFDFAFSHAIISTEVFHGIKKHCDFSEKRRTRDYTRDCQLNIEKFLESYTNIDIFNIYSPICMKDYERPNSTRPIVVPYALTQHVLWNTLPSSGYDYCPEDHVRMYFNKKNVQRAIHANTTNLPYPFTVCSGIIQKWNDSPTTVLPLIQKLLSVGLRIWMYSGDIDGRVPILSTRYSLEELKLNVTNEWRAWFEGKEVAGWVEEYEGGLTFASVRGAGHQVPVSAPQQALSLFSHFLSSQPLPSSRF 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00330 466 Gene3D - 317 354 - -
Phco9g00330 466 FunFam Carboxypeptidase 363 458 - -
Phco9g00330 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 121 IPR001563 GO:0004185|GO:0006508
Phco9g00330 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Phco9g00330 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Phco9g00330 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 132 IPR001563 GO:0004185|GO:0006508
Phco9g00330 466 Pfam Serine carboxypeptidase 34 457 IPR001563 GO:0004185|GO:0006508
Phco9g00330 466 SUPERFAMILY alpha/beta-Hydrolases 24 463 IPR029058 -
Phco9g00330 466 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Phco9g00330 466 Gene3D - 363 457 - -
Phco9g00330 466 Gene3D alpha/beta hydrolase 25 283 IPR029058 -
Phco9g00330 466 FunFam Carboxypeptidase 24 283 - -
Phco9g00330 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 29 445 IPR001563 GO:0004185|GO:0006508
Phco9g00330 466 ProSitePatterns Serine carboxypeptidases, serine active site. 172 179 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00330 Phco-Chr9 2246337 2248665 Dispersed/Proximal