Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00329 ATGGAGATAAATTTGGGGAAACTTGCATTTGATGTTGATTTTCATCCGTCAGATAATCTTGTGGCCACGGGTCTAATTGACGGCGACCTTCACCTATATCGTTATAGCACTGATAGTGTCCCTGTGAGGCAGTTGGAAGTTCATGCACACACTGAGTCTTGCAGGGCTGCTCGATTCATCAATGGTGGACGTGTGCTATTGACGGGTTCTCCAGATTGCTCTATACTGGCTACGGATGTGGAGACTGGATCTACAATTACCCGTATTGATAATGCTCATGAGGCTGCAGTAAATAGATTGATAAACTTGACCGAGTCAACTGTTGCCTCCGGAGACGATGAGGGTTGTATAAAGGTTTGGGATACCAGAGAACGCTCTTGTTGCAATTCTTTTAATGCCCATGAAGATTACATTTCAGACATGACTTTTGCATCTGATGCTAGGAAACTTTTGACAACAAGTGGAGACGGGACTCTGTCTGTTTGCAATCTTCGAAGAAATACGGTGCAAACTCGGTCTGAATTTTCTGAAGATGAGTTGCTGTCTGTTGTTTTAATGAAGAATGGTAGGAAAGTTGTGTGCGGCTCACAAACTGGAATCATTCTGTTGTATTCATGGGGATGCTTCAAGGATTGTAGTGATCGATTTACTGATCTCTCTTTCAACTCTATTGATGCAATGTTGAAGGTTGATGAAGATAGAATTATTACTGGATCAGAGAATGGAATTATCAACTTGGTCGGGATATTACCCAACAGAGTCATCCAGCCAATAGCTGAACACTCAGATTGTCCTATTGAGTGTCTTGCATTCTCTCATGATAGAAAGTTCCTTGGAAGCATTGCACATGATCAAATGTTAAAGCTATGGGATTTGGATACCATACTACAAGATACAGGAAACACACAAACAAATGAAACTGAAGTGGTTGATAGTGATGATGATGAAATGGAACTAGATAAGGATACTACAAAGTTGAGTAAAGGGAACAAGAGAAAGAATGCAAATAATGAGCAAGCCTTTGGTGGTTCGAACAACTTCTTTGCCGATTTATAG 1056 0.4091 MEINLGKLAFDVDFHPSDNLVATGLIDGDLHLYRYSTDSVPVRQLEVHAHTESCRAARFINGGRVLLTGSPDCSILATDVETGSTITRIDNAHEAAVNRLINLTESTVASGDDEGCIKVWDTRERSCCNSFNAHEDYISDMTFASDARKLLTTSGDGTLSVCNLRRNTVQTRSEFSEDELLSVVLMKNGRKVVCGSQTGIILLYSWGCFKDCSDRFTDLSFNSIDAMLKVDEDRIITGSENGIINLVGILPNRVIQPIAEHSDCPIECLAFSHDRKFLGSIAHDQMLKLWDLDTILQDTGNTQTNETEVVDSDDDEMELDKDTTKLSKGNKRKNANNEQAFGGSNNFFADL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00329 351 PIRSF WD_rpt_55 1 351 IPR017422 -
Phco9g00329 351 SUPERFAMILY WD40 repeat-like 10 294 IPR036322 GO:0005515
Phco9g00329 351 Pfam WD domain, G-beta repeat 260 291 IPR001680 GO:0005515
Phco9g00329 351 Gene3D - 180 347 IPR015943 GO:0005515
Phco9g00329 351 PANTHER WD REPEAT-CONTAINING PROTEIN 55 8 294 - -
Phco9g00329 351 SMART WD40_4 82 121 IPR001680 GO:0005515
Phco9g00329 351 SMART WD40_4 1 34 IPR001680 GO:0005515
Phco9g00329 351 SMART WD40_4 251 291 IPR001680 GO:0005515
Phco9g00329 351 SMART WD40_4 38 79 IPR001680 GO:0005515
Phco9g00329 351 SMART WD40_4 168 205 IPR001680 GO:0005515
Phco9g00329 351 SMART WD40_4 124 163 IPR001680 GO:0005515
Phco9g00329 351 Gene3D - 6 179 IPR015943 GO:0005515
Phco9g00329 351 ProSitePatterns Trp-Asp (WD) repeats signature. 278 292 IPR019775 -
Phco9g00329 351 ProSiteProfiles Trp-Asp (WD) repeats profile. 131 172 IPR001680 GO:0005515
Phco9g00329 351 MobiDBLite consensus disorder prediction 325 351 - -
Phco9g00329 351 ProSiteProfiles Trp-Asp (WD) repeats profile. 266 294 IPR001680 GO:0005515
Phco9g00329 351 MobiDBLite consensus disorder prediction 333 351 - -
Phco9g00329 351 FunFam WD repeat-containing protein 55-like 4 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00329 Phco-Chr9 2234950 2238921 Dispersed