Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco9g00327 | ATGGAGGGAAAAGGAACAGCAACCGCCACAGGTTGTTACAAGTGCGGCCGACCAGGTCACTGGTCAAGAGACTGCCCTTTCTCTGCTCCCAATCCCAATCCAAACCCTAACACCTCCACGGATCCCACTTCTACTCCTTCTTCCTCTTCTTTCAAGCCCAGATCCGCCGCCGAAAAGCCCAAGAAACTCCCCCGAACAAAGCCCAAACTAACACCGGAGATTCTTCTCTCCGACGACGGCCTTGGTTACGTCCTTCGTTATTTTCCTCGCCAGTTCAAATACCGTGGTCGCGGCCACGAGGTTCGTGATTTGGGTAACCTGCTTCAGTTGTACACCGAATGGCACTCTCGCTTGCTTCCTTATTACTCTTTCAATCAGTTTATTCATAAAGTGGAGAAAGTTGCTGCTACCAGGCGTGTCAAGACATGCCTTGGAGAATTGAGAGAAAGAGTTGCAAGTGGTGGAGATCCAACAAAACTGCGTGAACCACTGGTTGTGCATGACATTCCAATTGATGAACACGGATTTGCTGGATCTGCTGAAGATGGGGGCGCAACTCTTCAAGAGAAAGATGTGTTTGCGGATTCTGAAAATATTACTGACATTCAGGAAGACATGCTTAATGATATATATGATAAAGCTACCGAAGAACCTTCTCAGTCCATGGACAATGTGATTGGCACTAGCATGGCCTCAAAAAGTAACGCAACCGAAAAGACAGCAGAGGAAGTACAAAATAATGGATCCAGCCAGTCTGGCAAAGCTGAGATAACAGAAGAGCAGAGAGCTCGTATGGAAGCAAATAGGTTGAAGGCACTGGAAAGGCGTGCTGCTCGAGCTGCCTCATCACAAGCCCTCTAA | 861 | 0.4808 | MEGKGTATATGCYKCGRPGHWSRDCPFSAPNPNPNPNTSTDPTSTPSSSSFKPRSAAEKPKKLPRTKPKLTPEILLSDDGLGYVLRYFPRQFKYRGRGHEVRDLGNLLQLYTEWHSRLLPYYSFNQFIHKVEKVAATRRVKTCLGELRERVASGGDPTKLREPLVVHDIPIDEHGFAGSAEDGGATLQEKDVFADSENITDIQEDMLNDIYDKATEEPSQSMDNVIGTSMASKSNATEKTAEEVQNNGSSQSGKAEITEEQRARMEANRLKALERRAARAASSQAL | 286 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco9g00327 | 286 | ProSiteProfiles | Zinc finger CCHC-type profile. | 12 | 26 | IPR001878 | GO:0003676|GO:0008270 | |
| Phco9g00327 | 286 | SUPERFAMILY | Retrovirus zinc finger-like domains | 8 | 28 | IPR036875 | GO:0003676|GO:0008270 | |
| Phco9g00327 | 286 | MobiDBLite | consensus disorder prediction | 231 | 269 | - | - | |
| Phco9g00327 | 286 | PANTHER | TIMELESS INTERACTING-RELATED | 5 | 281 | IPR040038 | GO:0000076 | |
| Phco9g00327 | 286 | Coils | Coil | 255 | 275 | - | - | |
| Phco9g00327 | 286 | Gene3D | - | 6 | 44 | - | - | |
| Phco9g00327 | 286 | SMART | c2hcfinal6 | 11 | 27 | IPR001878 | GO:0003676|GO:0008270 | |
| Phco9g00327 | 286 | MobiDBLite | consensus disorder prediction | 24 | 70 | - | - | |
| Phco9g00327 | 286 | MobiDBLite | consensus disorder prediction | 40 | 54 | - | - | |
| Phco9g00327 | 286 | Pfam | Zinc knuckle | 11 | 26 | IPR001878 | GO:0003676|GO:0008270 | |
| Phco9g00327 | 286 | MobiDBLite | consensus disorder prediction | 231 | 256 | - | - | |
| Phco9g00327 | 286 | Pfam | Replication Fork Protection Component Swi3 | 69 | 150 | IPR012923 | GO:0005634|GO:0006974|GO:0031297 |