Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00325 ATGGCTTTGTCTTCACTTATTTCCAATATTCTTCTTCTGCTTCTTCTCTCTTTCACCAAAGCAGCTTTAGCTGTGTCAAAGCTTTCACTAACTGATCATCATAATTATCTTAGCCGGGAAGTACTCGCAGAACAAGAAGCTGATAGAGTTTATGGATTACCAGGGCAACCACCAGTGAAGTTCAAACAATATGCAGGTTATATCACAGTCAATGAAACTCATGGAAGAGCACTGTTTTATTGGTTCTTTGAGGCCACTCACAAACCACACAAAAAACCTGTTCTCTTATGGCTCAATGGAGGCCCAGGTTGTTCCTCAATTGGTTATGGAGAAGCAGAGGAGCTAGGACCCTTCTTTCCCCAGGACAGTAGCCAGCCAAAGCTAAAGTTGAACCCTTATTCATGGAACAATGCTGCCAATCTTTTGTTTTTGGAAAGCCCTGTTGGAGTGGGATTCTCCTACACCAACACCAGCAAGGATTTGGATGAGCTTGGTGACGCCAATACTGCTAAAGATTCACACACCTTCATAGTCAAGTGGTTTAGGAGATTTCCACAATTCAGATCACACAAGTTCTACATTGCTGGCGAAAGCTATGGAGGGCACTACGTTCCACAACTGTCGGAGCTCATTTTCGACAAGAATCTCAATCGTGCCAAGAAAGACTACATCAACTTCCAAGGATTCATGATTGGAAATGCAGCATTGGACGACGAAACAGATCAAAAGGGTTTGGTAGAGTATGCCTGGGATCATGCAGTGATATCTGATGCGTTATACCATAACATTACAACCCAATGCAATTTCAGATTAGAAAATCAAACAGATGAATGCAGAGCCGACATGGTTAAGTTCTTCGACGCGTATGACGTTATTGACATGTATAGCTTGTACACTCCCACATGTCTCAGCGACATCAACAGCACAGCCCCTGTCGTCAGAACCCCACAAACCTTTTCCAAACTTAATGAGTGGCATAGAAAACCAGCTGGCTATGATCCCTGTGCATCCGATTACACTGAAGTTTACCTAAACAAGCCAGAAGTCCAAAAGGCACTACATGCCAATGTCACCAATATTTCCTATCCATGGACTCACTGCGGTAGCATCACCTGGAATGACTCACCACCATCCATCCTTCCAGTCATCAAGAAGCTTGTTGCTGGTGGTCTTCGCATTTGGGTTTACAGTGGAGATACAGATGGAAGAGTTCCTGTAACTGGAACAAGATACACTCTGAAAAAGTTGGGCCTCCACATTGTTGAAGATTGGACTCCCTGGTATACTAGCCAACAGGTGGGAGGGTGGAGAGTGGTGTACGATGGGCTTACTTTTGTGACCATAAGAGGTGCTGGGCATCAAGTTCCAACCTACACTCCCAAACCAGCTCTGCAGATGCTACGACACTTCCTTGCAAATAAGCAATTACCATCTAAACCAATTTAA 1446 0.4412 MALSSLISNILLLLLLSFTKAALAVSKLSLTDHHNYLSREVLAEQEADRVYGLPGQPPVKFKQYAGYITVNETHGRALFYWFFEATHKPHKKPVLLWLNGGPGCSSIGYGEAEELGPFFPQDSSQPKLKLNPYSWNNAANLLFLESPVGVGFSYTNTSKDLDELGDANTAKDSHTFIVKWFRRFPQFRSHKFYIAGESYGGHYVPQLSELIFDKNLNRAKKDYINFQGFMIGNAALDDETDQKGLVEYAWDHAVISDALYHNITTQCNFRLENQTDECRADMVKFFDAYDVIDMYSLYTPTCLSDINSTAPVVRTPQTFSKLNEWHRKPAGYDPCASDYTEVYLNKPEVQKALHANVTNISYPWTHCGSITWNDSPPSILPVIKKLVAGGLRIWVYSGDTDGRVPVTGTRYTLKKLGLHIVEDWTPWYTSQQVGGWRVVYDGLTFVTIRGAGHQVPTYTPKPALQMLRHFLANKQLPSKPI 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00325 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Phco9g00325 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Phco9g00325 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Phco9g00325 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 443 456 IPR001563 GO:0004185|GO:0006508
Phco9g00325 481 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 49 460 IPR001563 GO:0004185|GO:0006508
Phco9g00325 481 Gene3D - 379 472 - -
Phco9g00325 481 Gene3D alpha/beta hydrolase 44 304 IPR029058 -
Phco9g00325 481 Gene3D - 335 370 - -
Phco9g00325 481 FunFam Carboxypeptidase 44 304 - -
Phco9g00325 481 Pfam Serine carboxypeptidase 54 473 IPR001563 GO:0004185|GO:0006508
Phco9g00325 481 ProSitePatterns Serine carboxypeptidases, histidine active site. 443 460 IPR033124 GO:0004185
Phco9g00325 481 FunFam Carboxypeptidase 379 473 - -
Phco9g00325 481 SUPERFAMILY alpha/beta-Hydrolases 45 476 IPR029058 -
Phco9g00325 481 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00325 Phco-Chr9 2204199 2207239 Dispersed/Tandem