Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00320 ATGTCTAGCCCTGGCGATGCCCGCATGCCTCGCGCCCCGGCGATGCCCGCATGCCTCGCGCCCCGGCGATGCCCGCATGCCTCGCGCCCCGGCGATGCCCGCATGCCTCGCGCCCCGGCGATGCCCGACGACACATCGCCACGCCTTCCTGAAGGTTCTTCATTCCACTATGTTACGTCCAAGCAAAATCAGAAGAACCCTAGGAAGTGTAAGCAGTGTTTGGAGAATTGGAGTTTGTTTGAGGCTGAGGCAATGACACGACCTTTCGGTGTGAAGGGGAAGAAGCGAAAGCACTCCCAATCCAAACAGTACTCAGAAGAAGAACACCAACAGCCGCCACCAAAGAAAGCTGTTGCTGAAGAGAGCAAAGAACCGTCACCAGAACCAGAACCAGAAAGAGAATCAGAACCAGCACCAACAGAAGAGGATGAATTGAGTGGTATCCCAATTGTGCCCAGTGAGAAAGACAGTACCAAACCCAACGTCATCTTCATCCTCGAAAAAGCTTCTCTCGAAGTCGCCAAAGTCGGCAAGACATATCAACTTTTGAACTCCGATGACCATGCCAATTTCCTCCGCAAAAATAACAAGAATCCTGGAGATTATAGGCCTGATATTACACATCAATCTCTGCTATCTATTCTGGATAGCCCACTGAATAAAGCTGGAAGATTGCGAAGTGTTTATATAAGGACGGAGAAAGGTGTTCTTATAGAGGTTAAGCCCTTTGTTCGTATTCCCAGAACATTCAAACGTTTTGCTGGTGTTATGTTGGAACTGCTTCAAAAGCTGAGCATATCTGCTGTTGGCAAGCGCGAGAAACTCCTCCGAACCATAAAAAATCCTGTCACACAGTATTTGCCTGTTAACTCACGAAAAATAGGTCTATCATATAGTTCAGAAAACCTTGTAGATATGGATGACTATGTATCAACTATTTCCAGCAATATGGACCTTGTTTTTGTGGTAGGAGCAATGGCCCATGGGAAGATTGAGACAGATTATACAGAAGATTATCTAGCAATTTCGGGGTACCCTCTAAGCGCTGCTTATTGTATTACAAGGATTACTGGTGCCCTTGAGAGAAAGTGGAAGATTTTGTGA 1104 0.4719 MSSPGDARMPRAPAMPACLAPRRCPHASRPGDARMPRAPAMPDDTSPRLPEGSSFHYVTSKQNQKNPRKCKQCLENWSLFEAEAMTRPFGVKGKKRKHSQSKQYSEEEHQQPPPKKAVAEESKEPSPEPEPERESEPAPTEEDELSGIPIVPSEKDSTKPNVIFILEKASLEVAKVGKTYQLLNSDDHANFLRKNNKNPGDYRPDITHQSLLSILDSPLNKAGRLRSVYIRTEKGVLIEVKPFVRIPRTFKRFAGVMLELLQKLSISAVGKREKLLRTIKNPVTQYLPVNSRKIGLSYSSENLVDMDDYVSTISSNMDLVFVVGAMAHGKIETDYTEDYLAISGYPLSAAYCITRITGALERKWKIL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00320 367 Gene3D - 162 367 IPR029026 -
Phco9g00320 367 MobiDBLite consensus disorder prediction 1 69 - -
Phco9g00320 367 FunFam Ribosomal RNA small subunit methyltransferase 162 367 - -
Phco9g00320 367 SUPERFAMILY alpha/beta knot 150 366 IPR029028 -
Phco9g00320 367 Pfam EMG1/NEP1 methyltransferase 164 361 IPR005304 GO:0070037|GO:0070475
Phco9g00320 367 MobiDBLite consensus disorder prediction 100 134 - -
Phco9g00320 367 CDD Nep1-like 162 361 IPR005304 GO:0070037|GO:0070475
Phco9g00320 367 MobiDBLite consensus disorder prediction 52 69 - -
Phco9g00320 367 MobiDBLite consensus disorder prediction 90 154 - -
Phco9g00320 367 PANTHER NEP1/MRA1 113 367 IPR005304 GO:0070037|GO:0070475
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00320 Phco-Chr9 2178141 2185451 Dispersed