Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00319 ATGAAGCTCCAAGTTGTTCGCGCGGCGCTCCCCGCCGCAGCCACCACCACCCCTTTTCTCCCCAGACTCTTCTCCGCGTCCAAATTAGACGACGAAAACGATGGTCTTTTTGTGTCACTCCTTTGCGACATCGTTCGAGGAAAACAGAGTTGGAAGGTGGCTTTGAACGACGCTTCAATTTCATCGGCATTGAGGCCCCATCACGTGGAACAAGTCTTGATCAACACCTTGGACGATTCCAAGTTAGCTTTGAGGTTCTTCAACTTTCTGGGTCTGCACAAAAACATGAACCACTCCGCAGCCTCCTTCGCCATCTTGATCCACGCGCTTGTTCAGTCCAGACTCTTCTGGCCCGCTAATTCCCTCTTGCACACCCTTCTCCTTCGTGGGTCCCCCCCAAACTACGTTTTTTCACATTTTCTGCACTCTTACAAGCATTGTAAGTTTGCGTCCACTTTGGGTTTCGATTTGCTGGTTCAGAGTTACGTGCTAAGTTCACGAGTTTCTGATGCTGTGGTCGTGGTGAAACTCATGTTTGCCAATGCTTTGTTGCCTGAGGTTAGAACATTGAGCTCCCTCTTGAACGGGCTTTTGAGAGTTAGAAAATTTATAACGGTTTGCGAATTGTTTGATGAGTCTGTGAATGCGGGTGTTCGACCTGATCCTTATACTTGCTCCGCTGTGGTTCGGAGTCTCTGCGAATTGAAAGATTTTTGTAGGGCTAAGGAGAAGATTCTGTGGATGGAATCTAATAGGTTTGCTTTGAGTGTTGTGACTTACAATGTCTTGATTCATGGGCTTTGCAAGGGTGATAGAGTTTGGGAAGCTGTTGAGGTTAAAAGATCGTTGAGGGTAAAGGGTTTGGAAGCTGATGTTGTTACATACTGTACATTAGTGCTTGGTTTTTGTAGGGTGCAACAATTTGAGGCTGGAATTCAGCTTATGGATGATATGGTTGAATTGGGGCTTGCTCCATCCGAAGCTGCTGTGTCGGGATTAGTAGATGGATTGAGAAAGCAGGGAAAGATTGATGATGCTTATGAGTTGGTAGTTAAGGTAGGGAGGTCTGGTTTTGTGCCGAATTTGTTTGTTTATAATGCATTGATCAATTCTTTGTGCAAAGGTGGAGATATGAATAAGGCAGAGTTGCTTTATAATAATATGAGTTTGATGAACTTGCATCCCAATGGTATTACTTATTCCATTCTTATTGATTCCTTCTGCAGAATGGGGAGGTTGGATGTTGCAAGATCTTATTTTAATAGAATGATAGAAAATGGTATAAGAGAAACTCTATATGCCTACAACTCTTTGATAAATGGCCAATGCAAGTTTGGGGATTTGAATGTAGCCGAGTCTCTGTTTACTGAGATGATCAATAAAGGGGTGGAGCCAACTGCTACAACTTTTACGTCATTGATTAGTGCTTATTGCAAAAACCTACAACTACTAAAAGCATTTGAGCTATATAATGAGATGGTTGAGAAAGGAGTTACTCCAAACATTTATACTTTCACAACACTTATTTCTGGGCTTTGCAGCACTAATAATATGGCAGAAGCATCCAAACTTTTTGATGATTTGCTTGAAAGGAAAATCAAGCCAACTGAGGTGACATATAATGTGTTGATTGAAGGGTATTGTAGGGATAACAAGATTGATAAAGCCTTTGAATTGCTTGAAGACATGCTTCAAAAGGGCCTTGTCCCTGATACATATACCTATAGACCTATTATCAGTGGCCTTTGCTCTAATGGTAGGGTTTCTGAAGCTGGAGATTTTATTGATGCTCTCCACAAGCAGAAAGTAAAGTTAAATGAGATGTGCTATAGTGCACTTCTACATGGTTATTGCCAGGAAGGAAGATTGGTGGAGGCACTGAGTGCTTCTTGTGAAATGATTCAAAGAGGAATCAACATGGATCTGGTTTGCCATGCTGTTCTTATCGATGGTGCTCTAAAGCAGCCAGACAGGAAAACATTTTTTGATCTCTTAAAAAATATGCATGATCAAGGATTGAGACCTGATAATGTAATATATACAAGTATGATAGATGCATACTCCAAAGAAGGATCTCTAAAGAAAGCTTTTGAATGCTGGGATTTGATGGTTACTGAGGAATGCTTTCCTAATGTCGTGACTTATACTGCTTTGATGAATGGTTTATGCAAAGCAGGAGAAATGGACAGAGCAGGTCTTCTTTTTAAAAAAATGCAGGCTGCAAATGTCCCTCCCAATTCAATCACGTATGGCTGTTTTCTTGACAATCTTACGAAGGAGGGGTATGTGAAGGAAGCTACAGGGCTTCACCATGCAATGCTTAAAGGGCTTTTAGCTAACACTGTAACATACAACATTATTATCCGAGGCTTCTGCAGACTGGGTAGATTTCATGAAGCCACTGAAGTTCTTTCTGAAATGACTGAAAATGGTATTTTCCCTGACTGTGTTACCTATTCAACATTAATTTATGAGTATTGCAAAAGTGGCAATGTAGGGGCAGCTATTAAGTTATGGGATACCATGTTAAAGAAAGGTCTAAAACCAGATTTGGTTGCATACAACTTGCTAATATATGGCTGTTGTGTTAATGGAGAGCTCGACAAGGCATTTGAGTTGCGTGATGATATGTTGAGGAGAGGGATGAAGCCAAGACAAAATTTACGAGAATTGCAGAAGGGTGAAGATAAGAGCACTAGTTAA 2703 0.4129 MKLQVVRAALPAAATTTPFLPRLFSASKLDDENDGLFVSLLCDIVRGKQSWKVALNDASISSALRPHHVEQVLINTLDDSKLALRFFNFLGLHKNMNHSAASFAILIHALVQSRLFWPANSLLHTLLLRGSPPNYVFSHFLHSYKHCKFASTLGFDLLVQSYVLSSRVSDAVVVVKLMFANALLPEVRTLSSLLNGLLRVRKFITVCELFDESVNAGVRPDPYTCSAVVRSLCELKDFCRAKEKILWMESNRFALSVVTYNVLIHGLCKGDRVWEAVEVKRSLRVKGLEADVVTYCTLVLGFCRVQQFEAGIQLMDDMVELGLAPSEAAVSGLVDGLRKQGKIDDAYELVVKVGRSGFVPNLFVYNALINSLCKGGDMNKAELLYNNMSLMNLHPNGITYSILIDSFCRMGRLDVARSYFNRMIENGIRETLYAYNSLINGQCKFGDLNVAESLFTEMINKGVEPTATTFTSLISAYCKNLQLLKAFELYNEMVEKGVTPNIYTFTTLISGLCSTNNMAEASKLFDDLLERKIKPTEVTYNVLIEGYCRDNKIDKAFELLEDMLQKGLVPDTYTYRPIISGLCSNGRVSEAGDFIDALHKQKVKLNEMCYSALLHGYCQEGRLVEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKNMHDQGLRPDNVIYTSMIDAYSKEGSLKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKKMQAANVPPNSITYGCFLDNLTKEGYVKEATGLHHAMLKGLLANTVTYNIIIRGFCRLGRFHEATEVLSEMTENGIFPDCVTYSTLIYEYCKSGNVGAAIKLWDTMLKKGLKPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGMKPRQNLRELQKGEDKSTS 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00319 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 571 605 IPR002885 -
Phco9g00319 900 Pfam PPR repeat 434 463 IPR002885 -
Phco9g00319 900 Pfam PPR repeat 609 638 IPR002885 -
Phco9g00319 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 396 430 IPR002885 -
Phco9g00319 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 431 465 IPR002885 -
Phco9g00319 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 780 814 IPR002885 -
Phco9g00319 900 SUPERFAMILY TPR-like 361 565 IPR011990 GO:0005515
Phco9g00319 900 Pfam PPR repeat 845 877 IPR002885 -
Phco9g00319 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 256 290 IPR002885 -
Phco9g00319 900 Gene3D Tetratricopeptide repeat domain 658 763 IPR011990 GO:0005515
Phco9g00319 900 Gene3D Tetratricopeptide repeat domain 577 657 IPR011990 GO:0005515
Phco9g00319 900 Gene3D Tetratricopeptide repeat domain 154 240 IPR011990 GO:0005515
Phco9g00319 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 326 360 IPR002885 -
Phco9g00319 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 815 849 IPR002885 -
Phco9g00319 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 850 884 IPR002885 -
Phco9g00319 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 501 535 IPR002885 -
Phco9g00319 900 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL 476 622 - -
Phco9g00319 900 NCBIfam pentatricopeptide repeat 852 884 IPR002885 -
Phco9g00319 900 NCBIfam pentatricopeptide repeat 398 428 IPR002885 -
Phco9g00319 900 NCBIfam pentatricopeptide repeat 782 816 IPR002885 -
Phco9g00319 900 NCBIfam pentatricopeptide repeat 364 396 IPR002885 -
Phco9g00319 900 NCBIfam pentatricopeptide repeat 609 641 IPR002885 -
Phco9g00319 900 NCBIfam pentatricopeptide repeat 503 537 IPR002885 -
Phco9g00319 900 NCBIfam pentatricopeptide repeat 678 712 IPR002885 -
Phco9g00319 900 NCBIfam pentatricopeptide repeat 293 326 IPR002885 -
Phco9g00319 900 NCBIfam pentatricopeptide repeat 817 850 IPR002885 -
Phco9g00319 900 NCBIfam pentatricopeptide repeat 538 572 IPR002885 -
Phco9g00319 900 NCBIfam pentatricopeptide repeat 469 502 IPR002885 -
Phco9g00319 900 NCBIfam pentatricopeptide repeat 713 746 IPR002885 -
Phco9g00319 900 NCBIfam pentatricopeptide repeat 433 466 IPR002885 -
Phco9g00319 900 NCBIfam pentatricopeptide repeat 258 291 IPR002885 -
Phco9g00319 900 NCBIfam pentatricopeptide repeat 573 607 IPR002885 -
Phco9g00319 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 711 745 IPR002885 -
Phco9g00319 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 466 500 IPR002885 -
Phco9g00319 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 361 395 IPR002885 -
Phco9g00319 900 Gene3D Tetratricopeptide repeat domain 353 448 IPR011990 GO:0005515
Phco9g00319 900 Gene3D Tetratricopeptide repeat domain 241 352 IPR011990 GO:0005515
Phco9g00319 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 606 640 IPR002885 -
Phco9g00319 900 Pfam PPR repeat family 535 584 IPR002885 -
Phco9g00319 900 Pfam PPR repeat family 780 828 IPR002885 -
Phco9g00319 900 Pfam PPR repeat family 256 304 IPR002885 -
Phco9g00319 900 Pfam PPR repeat family 360 409 IPR002885 -
Phco9g00319 900 Pfam PPR repeat family 675 724 IPR002885 -
Phco9g00319 900 Pfam PPR repeat family 469 514 IPR002885 -
Phco9g00319 900 Gene3D Tetratricopeptide repeat domain 764 898 IPR011990 GO:0005515
Phco9g00319 900 Gene3D Tetratricopeptide repeat domain 449 565 IPR011990 GO:0005515
Phco9g00319 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 536 570 IPR002885 -
Phco9g00319 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 291 325 IPR002885 -
Phco9g00319 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 186 220 IPR002885 -
Phco9g00319 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 676 710 IPR002885 -