Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00295 ATGCTTCAAAGCTTGGTCCCGCGATCCCCCCGCACTTCCAACCCTAACGACATGAAAACTAAGCGCACCGTTGACACCGTTGATTCTCCCGCCGATCAACCTTCTTTCAAGCGGACCAACTTCACCGCCGATACAGCCGCCGAGGAAGACCAGGCCTTCGATCCCCAACCGCACATCGGTGAGTCCACTGGCCTCAAACTCCTCGGCCTCCTCCTCCAATGCGCAGAGTGCGTCGCCATGGATAAACTCGACTTCGCCAACGACTTGCTCCCGGAGATCGCCGAACTCTCGTCGCCGTTCGGGACCTCGCCCGAGCGCGTCGGAGCGTACTTCGCGCAGGCGCTGCAGGCGCGTGTGGTGAGCTCCTGCCTCGGCTCCTACTCTCCTCTGACTGCCAAATCGGTAACCCTAACTCAGTCGCAGCGAATCTTCAACGCCTTCCAATCCTACAACTCGGTCTCGCCACTGGTGAAGTTCTCTCACTTCACCGCGAACCAGGCTATATACCAGGCCCTGGAAGGCGAGGATCGCGTCCATATCATCGACCTCGATATCATGCAAGGTCTCCAATGGCCAGGTCTGTTCCACATCCTCGCCTCTCGCTCGAAGAAGATCCGCTCCATGAGAATAACCGGATTCGGATCCTCCTCGGAGCTCCTGGACTCCACCGGCCGGAGACTCGCGGATTTCGCGAGCTCGCTCGGGCTCCCGTTCGAGTTTCACCCGGTGGAGGGGAAAATCGGAAGCGTGACGGAACTGAGTCAACTCGGCGTTCGAGCTAACGAGGCGATCGTGGTGCACTGGATGCATCATTGCTTGTATGACATAACCGGGAGCGATTTAGGGACGTTGAGATTGCTGACTCAGCTTAGGCCGAAACTGATCACGACCGTCGAGCAGGACCTAAGCCACGCCGGGAGCTTCCTTGCGCGGTTCGTGGAGGCCTTGCATTATTACAGCGCGTTGTTCGACGCGCTCGGGGATGGTTTGGGTGCGGACAGCCTTGAGAGGCACACGGTGGAGCAGCAGCTTTTGGGCTGCGAGATCAGGAACATCGTGGCCGTGGGCGGTCCCAAGAGGACCGGAGAGGTTAAGTTGGAGCGGTGGGCGGATGAGTTGAAACGGGCCGGGTTTCGGGCCGTTTCCCTCCGGGGCAACCCTGCTGCACAAGCCAGTTTGTTGCTTGGAATGTTCCCTTGGAGAGGTTATACTCTGGTTGAAGAGAATGGTTCCTTGAAGCTTGGTTGGAAGGACCTCTCTCTCTTGATTGCCTCTGCTTGGCAACCCTCTGATTCCATTACTTAA 1305 0.5808 MLQSLVPRSPRTSNPNDMKTKRTVDTVDSPADQPSFKRTNFTADTAAEEDQAFDPQPHIGESTGLKLLGLLLQCAECVAMDKLDFANDLLPEIAELSSPFGTSPERVGAYFAQALQARVVSSCLGSYSPLTAKSVTLTQSQRIFNAFQSYNSVSPLVKFSHFTANQAIYQALEGEDRVHIIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSSELLDSTGRRLADFASSLGLPFEFHPVEGKIGSVTELSQLGVRANEAIVVHWMHHCLYDITGSDLGTLRLLTQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLGADSLERHTVEQQLLGCEIRNIVAVGGPKRTGEVKLERWADELKRAGFRAVSLRGNPAAQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLIASAWQPSDSIT 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00295 434 MobiDBLite consensus disorder prediction 1 37 - -
Phco9g00295 434 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 56 423 IPR005202 -
Phco9g00295 434 MobiDBLite consensus disorder prediction 1 20 - -
Phco9g00295 434 ProSiteProfiles GRAS family profile. 58 428 IPR005202 -
Phco9g00295 434 Pfam GRAS domain family 69 428 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00295 Phco-Chr9 2019572 2020876 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco9g00295 GRAS 7e-114 CL0063