Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00290 ATGAGAGTGGGAGCTAAGAAGGGAGAAGAAGAGATAAAAGTTGAATCTGGTTTTGGAGTTTCTGGGATTATAAAACTGAAAATAAAGCTTGAGGGTTGTGAAACTTGTGATCGAAGTTTGAACCTGGGCTGTGCAGATTGTTGTTATTATTGTTACATGGGATTTATGTGGCAAGAAGAAGGGTCGTCTTCTGTAACTTCTTCACCCCTGCAGCTCTTCTCCATGATGTCACTTTCACCTAGCTTAGGTTCTCCCAACAATCTCTTGCTTAGAGAAATGAAATCCGAGGAAAGGGGTTTGTACTTGATCCATTTGCTGCTCACCTGTGCAAATCACGTAGCTGCTGGTAATCTTGAAAATGCAAACACCACACTTGAGCAGATTTCCCTGCTTGCTTCCCCTGATGGGGATACTATGCAGCGAATCGCTGCTTATTTTATGGAATCACTTGCAGATCGGATTCTGAAAACATGGCCTGGGATCCACAGAGCCCTCAACTCAACTAGAGTGACTATGCTATCTGAAGAAATTCTTGTTCAGAAGCTCTTCTTTGAGCTTTTCCCTTTCTTAAAGGTGGCATATGTTCTCACAAATCAGGCCATCATTGAGGCCATGGAGGGTGAGAAAGTGATTCACGTAATTGATCTCAATGCTGCTGAAGCTGCTCAGTGGATTGCTCTCCTCCAAGTTTTGAGTGCGCGTCCTGAAGGCCCTCCTCATTTGAGAATCACTGGGATTCATCAGAAAAAGGAGATTCTGGATCAGATAGCTCATAGACTAACCGAAGAAGCAGAAAAGTTGGATATACCATTCCAATTCAACCCTGTAGTCAGCAAACTAGAAAATCTTGATTTTGACAAACTTCGTGTGAAAACTGGGGAGGCACTAGCAATAAGTTCCATACTCCAATTACATTCCCTTTTGGCCTGGGATGATGAAGCCTTAAAGAGAAAATCTCCTCGTCTGTTAAAAGGCTCAAGTGGAATTCACCTGCAAAGAGTCCTGCCACTGAGCCAAAGCACATTGGGTGATATGCTTGAGAAAGATATGATCAATGGGTACACCGCAAGTCCTGACTCAACCTCCTCGTCACCAGCATCTTTAACTACTTCCAATCCAATGAATATGGAGAGCTTTCTAAGTGCCTTATGGGGTTTATCACCAAAGGTCATGGTTGTGACAGAGCAAGACTGTAACCATAACGGTCCAACTCTGATGGATAGGCTACTTGAAGCACTATATTCTTATGCAGCATTGTTTGATTGTTTGGAATCCACTGTCTCTAGAACATCATTGGAGAGATTAAGGGTGGAGAAGATGATTTTTGGGGAGGAAATAAAGAACATCATTGCGTGTGAGGGGCCTGAAAGAAAGGAGAGACATGAAAAGCTTGAGAAGTGGTTCCAGAGATTTGATCAAGCTGGGTTCGGTAATGTGCCTTTGAGCTACTATGGTATGTTGCAAGCAAGGAGGTTCATCCAGAGCTATGGTTGTGAAGGATATAGAATGAGGGATGAAAATGGCTGTGTATTAATTTGCTGGCAGGATCGGCCAATGTTTTCAATATCAGCTTGGAGATCTAGGAAGTAA 1590 0.4302 MRVGAKKGEEEIKVESGFGVSGIIKLKIKLEGCETCDRSLNLGCADCCYYCYMGFMWQEEGSSSVTSSPLQLFSMMSLSPSLGSPNNLLLREMKSEERGLYLIHLLLTCANHVAAGNLENANTTLEQISLLASPDGDTMQRIAAYFMESLADRILKTWPGIHRALNSTRVTMLSEEILVQKLFFELFPFLKVAYVLTNQAIIEAMEGEKVIHVIDLNAAEAAQWIALLQVLSARPEGPPHLRITGIHQKKEILDQIAHRLTEEAEKLDIPFQFNPVVSKLENLDFDKLRVKTGEALAISSILQLHSLLAWDDEALKRKSPRLLKGSSGIHLQRVLPLSQSTLGDMLEKDMINGYTASPDSTSSSPASLTTSNPMNMESFLSALWGLSPKVMVVTEQDCNHNGPTLMDRLLEALYSYAALFDCLESTVSRTSLERLRVEKMIFGEEIKNIIACEGPERKERHEKLEKWFQRFDQAGFGNVPLSYYGMLQARRFIQSYGCEGYRMRDENGCVLICWQDRPMFSISAWRSRK 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00290 529 Pfam GRAS domain family 102 526 IPR005202 -
Phco9g00290 529 ProSiteProfiles GRAS family profile. 93 526 IPR005202 -
Phco9g00290 529 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 92 525 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00290 Phco-Chr9 1960737 1963488 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco9g00290 GRAS 2.2e-137 CL0063