Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00287 ATGGCTACCAACACCATTCATGGCAACAATGAATCTGCTCAACCCAACAACATTGCTTCCTCAAAGCAACCTCTCCCTCCTGCCAAGACTGTTGATTCTCAATCTGTTCTCAGAAGGCTGCAATCTGAATTGATGGCTTTGATGATGAGTGGAGATTCTGGGATATCTGCATTTCCCGAGGAGGACAACATATTCTTCTGGAAGGGAACAATCACAGGAAGCAAAGATACTGTATTTGAAGGCACAGAGTATAAGCTGTCCCTCTCTTTTCCCAATGATTACCCTTTTAAGCCTCCAAAAGTCAAGTTTGAAACAACCTGCTTCCACCCTAATGTGGATGTGCATGGAAATATATGCTTAGACATACTCCAGGATAAATGGTCATCTGCTTATGATGTTAGAACAATTCTTATATCCATCCAAAGTCTACTTGGAGAGCCAAACATTAGTTCACCACTAAATCCACAAGCAGCACAGCTCTGGAGCAATCAAGAAGAATACAGGAAGATGGTTGAGAAGTTGTACAAATCTGCAAATTGA 540 0.4167 MATNTIHGNNESAQPNNIASSKQPLPPAKTVDSQSVLRRLQSELMALMMSGDSGISAFPEEDNIFFWKGTITGSKDTVFEGTEYKLSLSFPNDYPFKPPKVKFETTCFHPNVDVHGNICLDILQDKWSSAYDVRTILISIQSLLGEPNISSPLNPQAAQLWSNQEEYRKMVEKLYKSAN 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00287 179 FunFam ubiquitin-conjugating enzyme E2 20 29 177 - -
Phco9g00287 179 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 38 172 - -
Phco9g00287 179 SMART ubc_7 38 179 - -
Phco9g00287 179 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 108 123 IPR023313 -
Phco9g00287 179 MobiDBLite consensus disorder prediction 1 32 - -
Phco9g00287 179 CDD UBCc 38 175 IPR000608 -
Phco9g00287 179 Gene3D Ubiquitin Conjugating Enzyme 29 179 IPR016135 -
Phco9g00287 179 Pfam Ubiquitin-conjugating enzyme 39 173 IPR000608 -
Phco9g00287 179 SUPERFAMILY UBC-like 32 175 IPR016135 -
Phco9g00287 179 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 35 179 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00287 Phco-Chr9 1933633 1934824 Dispersed/Transposed