Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00246 ATGGCATCCGATCCTGAGCAACCTACTTCTGCAAAGGAAGGAAGTTCCACTGGTGAGATTGGGAGTGCAAGGGAGCCTTTGCTTATTGGGGTTCATGACTCCGAGAGCTATTCTGTCTCTGCTGCAATTCTCCCGTTTCTCTTCCCAGCTTTTGGTGGCCTACTATTTGGCTATGATATTGGTGCCACTTCTTCTGCAACCATTTCCATTCAGTCACCGACACTAAGTGGAGTATCCTGGTACCAGTTGTCCTCCGTTGAAATTGGTCTTTTTACTAGTGGATCATTATATGGCGCCTTGATTGGCTCCTTGTTGGCCTTCAATGTTGCTGACTTCTTAGGTAGAAGAAGGGAGCTCATTGTAGCTGCATTACTATATTTTGTTGGAGCACTTGTAACAGCACTCGCTCCTAATTTTCCTGTATTGGTGCTTGGGAGACTTATATTTGGCACTGGAATTGGACTGGCAATGCATGCTGCTCCAATGTACATTGCAGAGACAGCTCCAACACCAATACGTGGACAATTAATATCTCTAAAAGAGTTTTTTATAGTACTTGGGATGGTTGCAGGATATGGATTTGGTAGCTTGTTTGTAGATACTGTAGCCGGGTGGCGGTACATGTTTGGAGTTAGTAGTCCTGTAGCAATAATCATGGGAGTTGGAATGTGGTGGCTCCCAGCTTCTCCTAGATGGTTACTTTTGCGTGCTATACAGGGAAAAGGGGATGTTCAGGATTCGAAAGAGATAGCAATTCGTAGTTTGTGCCAGCTTCGAGGTCAGGCTAGTGGTGATTCAGCTCATCGGCAAGTTGATGAGATTCTTGCAGAACTTTCTTATCTAGGTGAAGAAAAAGAAGTTACCTTCGGAGAAATATTCCAAGGAAAATGCTTGAAAGCCCTTTGGATTGGTGCGGGATTGGTCTTGTTTCAGCAGATCACAGGGCAACCCAGTGTGCTCTACTATGCAGCATCAATCTTTCAGAGTGCAGGATTTTCCGGAGCATCTGATGCAACCCGAGTCTCTATTCTCCTTGGGGCTTTTAAGTTGATTATGACCGGAGTCGCAGTTGTCGTTGTTGATAAACTTGGAAGGAGGCCTTTACTTCTAGGAGGAGTTTCAGGAATAGTGATCTCTTTATTCCTTCTGGGTTCGTATTACGTTTTCTTGGATAATGCACCAGTTATTGCTGTTGTTGGTCTGCTGTTGTACGTGGGCTGTTACCAGATTTCCTTTGGTCCAATTGGTTGGCTCATGATAGCAGAGATTTTCCCCTTACGCCTAAGAGGTAGAGGACTTGGTATAGCTGTACTCGTCAATTTTGGTGCAAATGCTCTGGTGACATTTGCTTTTTCCCCACTGAAGGAATTACTGGGAGCAGGAATCTTGTTTTACATCTTTTGTGTAATAGCTGTGGCATCTCTTGCGTTCATATACCTTGTTGTACCAGAAACAAAGGGGCTTACACTGGAGGAGATCGAAGCCAAATGCCTCTAA 1497 0.4462 MASDPEQPTSAKEGSSTGEIGSAREPLLIGVHDSESYSVSAAILPFLFPAFGGLLFGYDIGATSSATISIQSPTLSGVSWYQLSSVEIGLFTSGSLYGALIGSLLAFNVADFLGRRRELIVAALLYFVGALVTALAPNFPVLVLGRLIFGTGIGLAMHAAPMYIAETAPTPIRGQLISLKEFFIVLGMVAGYGFGSLFVDTVAGWRYMFGVSSPVAIIMGVGMWWLPASPRWLLLRAIQGKGDVQDSKEIAIRSLCQLRGQASGDSAHRQVDEILAELSYLGEEKEVTFGEIFQGKCLKALWIGAGLVLFQQITGQPSVLYYAASIFQSAGFSGASDATRVSILLGAFKLIMTGVAVVVVDKLGRRPLLLGGVSGIVISLFLLGSYYVFLDNAPVIAVVGLLLYVGCYQISFGPIGWLMIAEIFPLRLRGRGLGIAVLVNFGANALVTFAFSPLKELLGAGILFYIFCVIAVASLAFIYLVVPETKGLTLEEIEAKCL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00246 498 PRINTS Sugar transporter signature 311 321 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00246 498 PRINTS Sugar transporter signature 421 433 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00246 498 PRINTS Sugar transporter signature 53 63 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00246 498 PRINTS Sugar transporter signature 143 162 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00246 498 PRINTS Sugar transporter signature 398 419 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00246 498 Pfam Sugar (and other) transporter 48 495 IPR005828 GO:0016020|GO:0022857|GO:0055085
Phco9g00246 498 ProSitePatterns Sugar transport proteins signature 1. 356 372 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phco9g00246 498 MobiDBLite consensus disorder prediction 1 20 - -
Phco9g00246 498 MobiDBLite consensus disorder prediction 1 17 - -
Phco9g00246 498 NCBIfam sugar porter family MFS transporter 14 493 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco9g00246 498 FunFam D-xylose-proton symporter-like 3, chloroplastic 38 497 - -
Phco9g00246 498 ProSitePatterns Sugar transport proteins signature 1. 106 123 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phco9g00246 498 ProSiteProfiles Major facilitator superfamily (MFS) profile. 45 486 IPR020846 GO:0022857
Phco9g00246 498 CDD MFS_GLUT10_12_Class3_like 48 493 - -
Phco9g00246 498 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 40 497 - -
Phco9g00246 498 SUPERFAMILY MFS general substrate transporter 46 494 IPR036259 -
Phco9g00246 498 Gene3D MFS general substrate transporter like domains 36 496 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00246 Phco-Chr9 1593642 1601204 Transposed