Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00244 ATGAAATGCTGTGATGTGATTTGCAGAGGAGAAGAGGGAATGGCTTACATGTGTGCAGATAGTGGGAACCTCATGGCCATTGCGCAGCAAGTTATCAAGCAGAAGCAGCAGCAAGAACAGCAGCAGCAGAAACAGCACCAGCACCAGCAGAAACACCACCACCAACACCACCCACACCACCACCACCACCAACACCATCTCAACCCTCTCTCTCTCCATCCAATTCCATGGAACAACACTCCCAACCTCGGCTACCCTCTCCATCCCACCGACTTCCCCGACCCCTTCCAACCCGATCCCCCATTCCACTTCCCGGACCCCCAATCCGCGCCCGCACCCGCCCCCTTCCGCTTCTCCGATTTCGACTCCGACGACTGGATGGACTCCCTCATCGCCGCCGCCGACACCCCCTCCTGGCACACCAATGCCGATTTTCCCTTCCCCTCCGATCTCAACCGCCTCATATTCCCCTCTTCCGACACTGCCGCCGCCACCACCTCCCTCCCCCTCCATCAAGTCCCTCCCCCGCCGGCGCAGGAACCAGTCAACGCCGGCCTCTCCGAACCTGAGTCCGCTCACCCGCTCCTCAAAGCCCTAACCGAGTGCGCCTCCTTCGCGGAAAGCGAACCGGATCAGGCCGCGGAATCCCTAGCCCGCCTGAGAAAATCCGTATCCCAGCACGGTAACCCCACTCAGCGTGTCGGCTTCTACTTTTGCGAAGCCCTCTCCCGTAAAATATGGGCCGAGAAAGAGAAGGTGGAGCCCAACAGCACCAGCACCAGCACAAGCACGACCACCTCGGAGGAGCTAACACTGTCTTACAAAGCCATGAACGACGCCTGCCCTTACTCCAAGTTCGCACACTTAACCGCCAACCAAGCCATCTTAGAAGCCACCGAAGGCGCCGCCAACATCCACATCCTCGACTTCGGCATCGTCCAAGGGATTCAGTGGGCCGCGCTCTTGCAGGCTTTCGCCACTCGCTCTTCCGGAAAGCCCAATAAGATCAAAATCTCCGGAATTCCCGCCATCGCTCTTGGGGCCTCTCCCGGCCCATCTCTCTCCGCCACCGGAAACCGCCTCTCCGAGTTCGCCAAACTCCTCGACCTGAACTTCGAGTTCACGCCTATTCTCACTCCCATTCACCACCTCGACCACAACAGCTTTTGCATTGACCCCAACGAGGCTCTGGCTGTGAACTTCATGCTCCAGCTCTATAACCTTCTGGACGAGCCTCCAACCGCGGTTGACACCGCCCTCAGGTTGGCCAAATCTCTCAACCCCAAAATCGTCACCCTCGGCGAGTACGAAGCAAGCCTCACACGTGTTGGCTTTCTCAACCGCTTCAAGACCGCGTTCAACTACTTCTCTGCTGTCTTTGAGTCGCTGGACCCTAACTTGCCCGCTGACTCGCCGGAGAGGTTTCAGGTGGAGAGTCTTCTCCTGGGACGGCGAATCGACGCGGTGATTGGGCCTGGGCCCGTGAGGGAGAGTATGGAGGACAGGGAGCAGTGGAGGGTTCTGATGGAGCGTGCTGGGTTTGAGTCTGTGAGTCTGAGTCATTATGCAGTTAGTCAGGCGAAGATACTTCTCTGGAATTACGGTTACAGTTCTCTGTTTTCGCTGCTTGAATCCACACCGCCGGGCTTCTTGTCTCTTGCTTGGAAAGATGTTCCTCTCTTGACTCTCTCCTCCTGGCGTTAA 1704 0.5769 MKCCDVICRGEEGMAYMCADSGNLMAIAQQVIKQKQQQEQQQQKQHQHQQKHHHQHHPHHHHHQHHLNPLSLHPIPWNNTPNLGYPLHPTDFPDPFQPDPPFHFPDPQSAPAPAPFRFSDFDSDDWMDSLIAAADTPSWHTNADFPFPSDLNRLIFPSSDTAAATTSLPLHQVPPPPAQEPVNAGLSEPESAHPLLKALTECASFAESEPDQAAESLARLRKSVSQHGNPTQRVGFYFCEALSRKIWAEKEKVEPNSTSTSTSTTTSEELTLSYKAMNDACPYSKFAHLTANQAILEATEGAANIHILDFGIVQGIQWAALLQAFATRSSGKPNKIKISGIPAIALGASPGPSLSATGNRLSEFAKLLDLNFEFTPILTPIHHLDHNSFCIDPNEALAVNFMLQLYNLLDEPPTAVDTALRLAKSLNPKIVTLGEYEASLTRVGFLNRFKTAFNYFSAVFESLDPNLPADSPERFQVESLLLGRRIDAVIGPGPVRESMEDREQWRVLMERAGFESVSLSHYAVSQAKILLWNYGYSSLFSLLESTPPGFLSLAWKDVPLLTLSSWR 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00244 567 MobiDBLite consensus disorder prediction 47 68 - -
Phco9g00244 567 ProSiteProfiles GRAS family profile. 186 567 IPR005202 -
Phco9g00244 567 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 165 561 IPR005202 -
Phco9g00244 567 Pfam GRAS domain family 196 567 IPR005202 -
Phco9g00244 567 Coils Coil 25 45 - -
Phco9g00244 567 MobiDBLite consensus disorder prediction 31 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00244 Phco-Chr9 1588236 1589939 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco9g00244 GRAS 8.5e-105 CL0063