Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00224 ATGAGAGACATTTGTCGAAACTTCCAGCGAGGCAGCTGTCAATATGGAGAAAGGTGTAGATATTTACATGTCAACCAACAGAGAAAACCTAATGTTCAAGGGTTTGGCGGACAAAGCGGTTCTCACCAACAGCAAAGTACAAATCCCTTTGGATTTGGGTCTGGTTCTGGCTCTGGCAACTTTGGGTCACAACAACAACAGAAGTCTAATCCTTTTGGTTTTGGCGCGCAGAACAGCTCCCAGTTAAACGGGGGGCCTCGTCCTGAGTATAAACCGAACCAATACAAGCCTTTTGAAAACAAATGGAATCGACAGTCGTCCAAACCCCAGAATGGTGTGAAATCTGATAACAACCCCCAACCAGTTGATCATAAATGCACAGATCCTGACAACTGCAAGCGCCAGATTGCAGAAGATTTTGAAAACGAGAAACCAATTTGGATACTTACATGCTACAGTCATTGCAAAGGTGCTCCTTGTGACATTGTTGGTGATATTAGCTTTGAAGAATTGCGAGCATCAGCTTATGAGGATGCAAAGCGTGGGATGAGCTTGCAATCAATAGTTGAGAAAGAGAGAAATATACTGAAATCCAAGATGCTTGAGTTTGAGAAACTACTTTCTGAACCTTACCAAAAACCAATAAGTTCTTCTCTTGACAGTCAAAGACCCCAATCCATTGGAGCCAATGCAAATCTGTTTTCAGGAACTTCTCAAAGTAATGGTCCTTTGGCAGTCTCAAGCTTTAGCCAACTTGGTTCTTCAATGAATATGGGTTTTGGAAGGCCATCTGCACCACCAACAAACACTCTGGCACAGCCTAGTTTCTTTGGAATTGGAGGAACAACCAGTGGCACCTTCGGTGTTCAAAGGAACCCCCTTTCTACATCTGTGGATTTGACAATGTTTCAGGGTTCAACTCAGCCAACATCAACCACATTCAATAACTCTGGTCCCAATACAATGTTTCAAGCAACATCAGATGTTCAGCTGTCAAATAAGTTACAAGCGGAGAATGTGTCAGGAGATGTCAGTATTTGGTTAAAAGATAAATGGACTCCGGGAGAGATCCCAGAAGAAGCTCCTCCTGATTCATTGGTACGGTAG 1107 0.4318 MRDICRNFQRGSCQYGERCRYLHVNQQRKPNVQGFGGQSGSHQQQSTNPFGFGSGSGSGNFGSQQQQKSNPFGFGAQNSSQLNGGPRPEYKPNQYKPFENKWNRQSSKPQNGVKSDNNPQPVDHKCTDPDNCKRQIAEDFENEKPIWILTCYSHCKGAPCDIVGDISFEELRASAYEDAKRGMSLQSIVEKERNILKSKMLEFEKLLSEPYQKPISSSLDSQRPQSIGANANLFSGTSQSNGPLAVSSFSQLGSSMNMGFGRPSAPPTNTLAQPSFFGIGGTTSGTFGVQRNPLSTSVDLTMFQGSTQPTSTTFNNSGPNTMFQATSDVQLSNKLQAENVSGDVSIWLKDKWTPGEIPEEAPPDSLVR 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00224 368 PANTHER NUCLEOPORIN-LIKE PROTEIN 2 4 327 - -
Phco9g00224 368 MobiDBLite consensus disorder prediction 30 128 - -
Phco9g00224 368 SMART c3hfinal6 1 25 IPR000571 GO:0046872
Phco9g00224 368 MobiDBLite consensus disorder prediction 98 120 - -
Phco9g00224 368 Pfam CCCH-type zinc finger 4 23 IPR041367 -
Phco9g00224 368 ProSiteProfiles Zinc finger C3H1-type profile. 4 26 IPR000571 GO:0046872
Phco9g00224 368 Gene3D - 1 72 - -
Phco9g00224 368 MobiDBLite consensus disorder prediction 30 87 - -
Phco9g00224 368 SUPERFAMILY CCCH zinc finger 3 27 IPR036855 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phco9g00224 zf-CCCH_4 9.9e-08 CL0537