Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00185 ATGCATGCAGTCCAAACTATGGACCCAGGTTCACAGTGCCACTTGCAGGGACCCAAAGGGATGAACTGGGATGAAGAGGGCATACGCATAATCAATCTTCTTAACGAGTGTGCCACTTTTACTGAATCAGGAAACTTCATTGGTGCAGATATTGCACTGTACCATCTCTCTCACCTTGTTTCCCCAGATGGTGATTCAATGCAACGTGTTGCTACTTATTTCACGGAGGCACTAGCATGTTGCCAAATGACAAAAAATTTGCGTGGTGTTCCAAAAGTTCTCCGTTTGGTGAGAACGTTATCAACTCCTGAACAACAACTCGTGAAGCAACTATTCTTTGATTTCTACCCCTTCTTAAAGATCGCACACACGGTCTCAAATCAGACCATTATAGAAGCCATGCAAGGGGAAACAGTGATTAATGTGCTTGATCTCAGTCCATCTAACGCTGATCAGTGGACTAATCTGATGCAGGGTTTGAGAGAGCGTTTAACAAACACACCATATCTGAAGATTACTGTCACAGCTATACATGAGAAGAAGGAAGTGTTGGAGCAAATGGGGTTGCATCTGAAAGTTGAAGCTGAAAGGTTGCACTTCCATTTCCAATTCAATCCTGTTGTAAGCAGTTTGGAGAGCCTTGACCCTGAGACATTGCCTATCAAGAAAGGTGAGCCTCTTGCAATTAGCTGTGTGCTTCAGCTTCACTCTCTTCTGGCTGCCAATGATGATGAGATGGTAAAAATGAGGGGTCAAAGGGTTTTTGCTGAGATGCTTGTAAAACAGAAGAATAAGAAGGTGAAACCAAGTCCTGACTCAGCACTCTCACCTTTTTCTCCATGTCCATCACATAAGATGGAGTGTTTTCTGAATGGTCTGTGGAGGCTGCAACCCAAAGTGATGGTCATCATTGAGCAGGAGTCAAATGTTAATGGACTTAGTTTGACAGAGAGGGTGTCCAAAGCTTTGAACTTTTACAGCACACTGTTTGATTGCTTGGAAGCCTCCACTTCAAGAACATTGGTAGGGAGAAGCCTATTGGAGAAGATGCTTCTTGGTGAAGAGATCAAGAACATTGTTGCATGTGAAGGGGTTGAGAGAAAGGAGAGGCATGAGAAACTTGAAACATGGATTCCAAGACTTGAATTGGCTGGATTTGGAAGGGTTCCTATCAGCTCCAATGGGATTTGGCTGGCAACAAAGTTGTTGCAGAGCTATGTACCAGGTTACCACATTCATCACAAGAACAAGTTCTTGTTCATTTGTTGGGAGAAAATTCCTCTCTTTTCAATTTCTGCATGGAAGTTTTAG 1311 0.4325 MHAVQTMDPGSQCHLQGPKGMNWDEEGIRIINLLNECATFTESGNFIGADIALYHLSHLVSPDGDSMQRVATYFTEALACCQMTKNLRGVPKVLRLVRTLSTPEQQLVKQLFFDFYPFLKIAHTVSNQTIIEAMQGETVINVLDLSPSNADQWTNLMQGLRERLTNTPYLKITVTAIHEKKEVLEQMGLHLKVEAERLHFHFQFNPVVSSLESLDPETLPIKKGEPLAISCVLQLHSLLAANDDEMVKMRGQRVFAEMLVKQKNKKVKPSPDSALSPFSPCPSHKMECFLNGLWRLQPKVMVIIEQESNVNGLSLTERVSKALNFYSTLFDCLEASTSRTLVGRSLLEKMLLGEEIKNIVACEGVERKERHEKLETWIPRLELAGFGRVPISSNGIWLATKLLQSYVPGYHIHHKNKFLFICWEKIPLFSISAWKF 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00185 436 Pfam GRAS domain family 31 435 IPR005202 -
Phco9g00185 436 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 27 430 IPR005202 -
Phco9g00185 436 ProSiteProfiles GRAS family profile. 21 435 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00185 Phco-Chr9 1214666 1216126 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco9g00185 GRAS 4.8e-98 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00185 9 1214666 1216126 Phco9g00185 9 1214666 1216126 ECH