Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00178 ATGATCAACCACCTCCTCAATACCTCAAAGAGCAAGAAGGGAATTCATAATACAGTGGTGAACCAAATCAGAGATGTGGCCCACCTAGCCGAGGATGTCATCGACACTTTCGTAGCCAAAGTTGTCATTTACAAGTGGAGAACCATGCAGGGGAAGATGCTCCACGACGTAGCCGACAAAGTAGACAAGATCAAAACAACTTTCAACGAAATACGTGACAAAAAGATCAAATATGACACTTTCAAAGAAAACAATAATCAATCCGCATCAGAGGAGGAGGAGGAGGATAAGGAAAGGGCGCAACTACTGCACAAGCTAAGAAAAAATGTGGAGGAAGAAGGTGCGGTTGGCTTTGTCCATGACTCCAAGGTTGTCATCAAACGACTCCTGGAAGGTGGTTCAAATCGTAAAGTTGTCTCTGTCGTTGGCATGGGGGGATTGGGCAAGACAACCCTTGCCCGAAAGTGCAGAGTTAGGGAGAATTTGCTTGGCCTTCTTAAGCATTTGATGCCAAATTTTGAACAACAATGCAGAGGTAACAAGAAAGGTAAGAAAAATACTCGAGAGATTACTAGCTTGAGTGAGGAGGAGCTGAAGAATCTGGTGCGGAACTGCTTGGAGAGCGAAACGTATCTTGTGGTGGTAGATGACCTGTGGAAAAAACAAGATTGGGACGAGTTCCTGAGTGAAGAAGAAAGTTGGGAGTTGTTTTGCAGGAAAGTGTTTAGGGGTGAAGACTACCCTTCTGATTTGGAGACTCTTGGAAAGCAGATGGTTCAAAGTTGTGGTGGTTTGCCGCTCTCCATCATTGTCTTAGCAGGGCTGCTGGCCTACAAGGAAAAGTCACACAGAGAATGGTCAAAAGTGGTGGGTCATGTTAATTGGTATCTCACTCAAGATGAGACCCAAGTGAAGGATATTGTTCTTAAACTCAGCTACGACAACTTGCCAAGGAGATTAAAACCATGCTTTCTTTATCTTGGGATATTTCCTGAAGACTTTGAAATCCCTGTTACGCCATTATTGCAAAAATGGGTTGCCGAGGGTTTTATACAAGATATAGGGAACAGAGACCCATATGAAGTTGCTGAAGACTACTTGTATGAGCTTATCGATCGTAGTTTGGTCCAAGTAGCAAAAGGGGAGACTAATGGAGGTGTTCACGTTCATGATCTTCTTCGAGATCTTTGCATATCACAGAGCAAAGAGGACAAAGTTTTTGAAGTTTGCACAAACAATAACAATCTAATCCCGACAAAACCTCGTAGACTGTCCATTCACAGTAACATGGGTCATTACATGTCTTCAAGCAACAATGACCATTCATGTATCCGATCCCTGTTCTTATTTGGCCCAGATTACCATGTTAGTGGGAGGGAGTGGAAATGGCTTTCAAAAGACTTCAAATTGGTTCGAGTGTTGGAGCTTGGACCAACACGGCTTAGCACCCTTTCTAATTTAGGGAACTTTATCCACTTAAGGTACTTGAGAATAGAAGCAACACCTCATCTTATATTTGTTCCATCTTCAATACTTAACCTTTGGAATCTACAAATCATAGACCATGGTTATTTTAGGTATCTGATTCAAATTTCTTTCCCGGTCCAAATGTGGAAACTTAAACATTTAAGGCATTTGAATGCACAAGGGCCTATCAAGCTACGAGGCAGTTGTTCAGGATCAGATGAGAAGATGTGGAATCTTCAAACCATCTCTGCCCTCGTAGTCAACAGACAAGCAACATCTCTGTTAAAAAAAGGAACATTCCCCAATCTTAAGAGGATAGGGTTGGTAGTGGTTTCTGGATACAAAGGTGAATTACCCAAATTTTTGAAGAGCCTACAACAATTAAGTTATTTGAATAAGTTAGAGATTTTCCTCGAGGATAAGTATGACAAAGGTTGCAAGCTGCAAGAAATGTTACAAAGCCTAGGGCAGTTCAATAGTCTAACTTTCTTAAAGATTGACAATGCTTTTGACCTTCTGACCTGTGCACTCACATTTCCTCCTCCAAACCTTACAGAGTTAACGTTGTCAGAGATTAACTGCATTACTGATGAGGGGATGAATGGTTTGGGAAATCACACCAAACTCAAAATTTTGAGACTTTTGGGAGCTAGATCTTATGATGGGGATTGCTTTGAACTGAATTGTGTGGGAGGCAGCTTTCCACAACTGGAAGTGTTTGAAATGTTTCATTTGAATCTTGGAAAGTGGAAATTAGGCAATGATGCAATGCCAAGGCTTCAGAGTGTGATCGTCCACGGTTGTAAAAGCTTAGATGATCTCCCAAATGAACTATGGTCTTTGAATGGCTTGGAAAATGTGGAGGTAACGAGATGCTCAGAACAAATATATTGCAGGCTAATCAGTTTAAAAACAAACAATGGGGTTTAG 2397 0.4155 MINHLLNTSKSKKGIHNTVVNQIRDVAHLAEDVIDTFVAKVVIYKWRTMQGKMLHDVADKVDKIKTTFNEIRDKKIKYDTFKENNNQSASEEEEEDKERAQLLHKLRKNVEEEGAVGFVHDSKVVIKRLLEGGSNRKVVSVVGMGGLGKTTLARKCRVRENLLGLLKHLMPNFEQQCRGNKKGKKNTREITSLSEEELKNLVRNCLESETYLVVVDDLWKKQDWDEFLSEEESWELFCRKVFRGEDYPSDLETLGKQMVQSCGGLPLSIIVLAGLLAYKEKSHREWSKVVGHVNWYLTQDETQVKDIVLKLSYDNLPRRLKPCFLYLGIFPEDFEIPVTPLLQKWVAEGFIQDIGNRDPYEVAEDYLYELIDRSLVQVAKGETNGGVHVHDLLRDLCISQSKEDKVFEVCTNNNNLIPTKPRRLSIHSNMGHYMSSSNNDHSCIRSLFLFGPDYHVSGREWKWLSKDFKLVRVLELGPTRLSTLSNLGNFIHLRYLRIEATPHLIFVPSSILNLWNLQIIDHGYFRYLIQISFPVQMWKLKHLRHLNAQGPIKLRGSCSGSDEKMWNLQTISALVVNRQATSLLKKGTFPNLKRIGLVVVSGYKGELPKFLKSLQQLSYLNKLEIFLEDKYDKGCKLQEMLQSLGQFNSLTFLKIDNAFDLLTCALTFPPPNLTELTLSEINCITDEGMNGLGNHTKLKILRLLGARSYDGDCFELNCVGGSFPQLEVFEMFHLNLGKWKLGNDAMPRLQSVIVHGCKSLDDLPNELWSLNGLENVEVTRCSEQIYCRLISLKTNNGV 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00178 798 Gene3D - 227 312 IPR042197 -
Phco9g00178 798 PRINTS Disease resistance protein signature 138 153 - -
Phco9g00178 798 PRINTS Disease resistance protein signature 262 276 - -
Phco9g00178 798 Gene3D - 1 82 - -
Phco9g00178 798 SUPERFAMILY L domain-like 389 793 - -
Phco9g00178 798 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 327 IPR027417 -
Phco9g00178 798 PANTHER DISEASE RESISTANCE PROTEIN RP 20 749 IPR044974 GO:0006952
Phco9g00178 798 Pfam NB-ARC domain 226 315 IPR002182 GO:0043531
Phco9g00178 798 Pfam NB-ARC domain 124 156 IPR002182 GO:0043531
Phco9g00178 798 Gene3D Ribonuclease Inhibitor 398 664 IPR032675 -
Phco9g00178 798 FunFam Probable disease resistance protein At1g63360 313 399 - -
Phco9g00178 798 Gene3D - 313 397 IPR036388 -
Phco9g00178 798 FunFam Probable disease resistance protein At5g66910 227 314 - -
Phco9g00178 798 Gene3D Ribonuclease Inhibitor 665 794 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00178 Phco-Chr9 1165654 1168223 Tandem