Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00177 ATGGCCAAGAAGAAGAGCTGGTTTAGTCTGGTGAAGAGGCTCTTCTTAAGGGACACACATCCCTCACAAGATAAGGAGAAAAGAAGGAAATGGATATTTGGAAGGCTAAAGAGCAAGAGATTACCTTCAATTACAGCTCCACTTCCATCAAAAGAGAAAACACTAAGCGAAGCAGAGGAAGAACAAAGCAAACATGCTTTAACAGTCGCCATTGCCTCAGCAGCTGCTGCTGAAGCTGCTGTCACTGCTGCACATGCTGCTGCTGAGGTTGTTCGCCTCACTGGGGTCTCACAATCTGCCCTTCTATGCAAAGAAAAGTCAGAAGAATCTCAACCTCTCAAAACTAGTAATGCTTCTCCTGAATTCACATACCAGTGCAAGAGGGCCATTCAAGAATCTGCTGCAGTCATCAGAATTCAAACTGCATTTAGGGGTTACCTGGCAAGGAAGGCTTTGAGGGCATTGAAGGGAATAGTGAAACTACAAGCTATCATTCGTGGCAGAGCAGTGAGACGCCAAGCTATGAGTACTCTTAAGTCCTTGCAGTCCATTGTGAGTATCCAATCACAGGTCTGTGCAAGGAGGCTCCAAATGGTTGGAGGGAGATGTGACTACACTGAAAATGAAGAGATGCATGATTCAAAAGACAAGATAATTAGGATGGACTCAAACAGTGAAAGAAAGTGTGATGAGAGCACTCCATCGAAGGAAGAGTTAGACACCTCCTGCATAAGCATGAAAGAAACAGTTCTCAAGAGAGAGAGAATAAAAGAATACTCATTTAACCATAGAAGGTCAGCAGAGTCAGAAAGAAGTAAAGTAAATGGAAGATGGAGATACTGGCTAGAGCAGTGGGTAGATACACAACTTTCAAAGAGTAAAGAACTTGAAGATTTAGACTCAGTTTTTAGCTCGCATGCTGGTGGTGCTGAGGAATATGGAAGCAGACAACTTAAGGTGAGAAGTATTAACAGGCAAAATCCAGTTGAAGGATTGGATTCTCCAACACTTGGTTCGAGAAGATCTTTTCCTCATAGGAGGCAGTGTTCGGTGGGAGAAGACCAGTCATTTTCAAGCTCTCCTGCAACCCCAGCATACATGGCTGCAACAGAATCGGCAAAAGCAAAAGCAAGATCAACAAGCTCACCAAAAATAAGGACAGGGGGGAACGTGGACATGAACTCTGATAGCTATTCACCATGCAAGAAGAAGCTATCCATTGCATCTTCTATTAACAGTGAAGTGCTTAGTGGTGGTAGGATGGCCAAGCTCAGTGGTAACCAGCAAAGATCTCCAAGCTTTAAGGGCCTTTCAGTGCCTATAAAATCAAGCCGAACCATCAAGGATCTCAGTATTAATTCAGATTGTTCACTGCCTAATTTGGGTCTTCAAGGTTCCTTCAAATGA 1407 0.4364 MAKKKSWFSLVKRLFLRDTHPSQDKEKRRKWIFGRLKSKRLPSITAPLPSKEKTLSEAEEEQSKHALTVAIASAAAAEAAVTAAHAAAEVVRLTGVSQSALLCKEKSEESQPLKTSNASPEFTYQCKRAIQESAAVIRIQTAFRGYLARKALRALKGIVKLQAIIRGRAVRRQAMSTLKSLQSIVSIQSQVCARRLQMVGGRCDYTENEEMHDSKDKIIRMDSNSERKCDESTPSKEELDTSCISMKETVLKRERIKEYSFNHRRSAESERSKVNGRWRYWLEQWVDTQLSKSKELEDLDSVFSSHAGGAEEYGSRQLKVRSINRQNPVEGLDSPTLGSRRSFPHRRQCSVGEDQSFSSSPATPAYMAATESAKAKARSTSSPKIRTGGNVDMNSDSYSPCKKKLSIASSINSEVLSGGRMAKLSGNQQRSPSFKGLSVPIKSSRTIKDLSINSDCSLPNLGLQGSFK 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00177 468 ProSiteProfiles IQ motif profile. 132 160 IPR000048 GO:0005515
Phco9g00177 468 MobiDBLite consensus disorder prediction 325 398 - -
Phco9g00177 468 ProSiteProfiles IQ motif profile. 156 183 IPR000048 GO:0005515
Phco9g00177 468 SMART iq_5 131 153 IPR000048 GO:0005515
Phco9g00177 468 MobiDBLite consensus disorder prediction 374 398 - -
Phco9g00177 468 Pfam IQ calmodulin-binding motif 134 153 IPR000048 GO:0005515
Phco9g00177 468 PANTHER IQ-DOMAIN 5-RELATED 1 408 - -
Phco9g00177 468 MobiDBLite consensus disorder prediction 349 366 - -
Phco9g00177 468 Gene3D - 129 183 - -
Phco9g00177 468 Pfam Protein of unknown function (DUF4005) 353 434 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00177 Phco-Chr9 1157388 1159623 Dispersed/Transposed