Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00173 ATGGAGGAGTCGTGCGCGCTGTGCGAGAAGAGGGCGGTGATGCTCTGCGAATCGGACCAGGCAAAGCTGTGCTGGGAGTGCGACGAGAAAGTTCACGGCGCCAATTTCTTGGTGGCGAAGCATTCGCGTGTGCTTCTGTGTCGTTCATGCCATTCCCCCACTCCCTGGAAAGCCTCCGGCACCAAACTCACACCCACCGTCTCCTTTTGTCAACCTTGCGTCGCCAATCGACATGCCAGGTTGCACCAGTTGGTCAACAATGTCTGCCAACAACACAAAGAAGGGGAGAATGAAGCGCTCCCAGTGTCCTCTGCTTCCGCCACGTCACCACACAGTGCTGCGGGTTTAACATTCAAACGATTGAGAAATAACTCTTTCTCTATGGATTCCCATGATGGGAAAGCGTGTTCTTCGTGA 417 0.542 MEESCALCEKRAVMLCESDQAKLCWECDEKVHGANFLVAKHSRVLLCRSCHSPTPWKASGTKLTPTVSFCQPCVANRHARLHQLVNNVCQQHKEGENEALPVSSASATSPHSAAGLTFKRLRNNSFSMDSHDGKACSS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00173 138 SMART bboxneu5 1 46 IPR000315 GO:0008270
Phco9g00173 138 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Phco9g00173 138 CDD Bbox1_BBX-like 5 46 - -
Phco9g00173 138 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 94 - -
Phco9g00173 138 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00173 Phco-Chr9 1140084 1140594 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco9g00173 zf-B_box 2.6e-06 No_clan