Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00167 ATGCAGAAAGAACACCACCACTTTCTGCATTTCTGCAAAATGAATCAACCAAACTTCAGTGTCTCTTCTCAAATTTTATCACGTAGATCTGCAAACTATAAACCTAACATTTGGAAATACCAATTTCTGCAGTCACTTGGCAGTAAATATCATAAAGATGAATTTGCTACACTGTTAAACAAGCGAATGTTGGAAGTGAAGAGTCTATTTCTACAAGAAGAGGATATTTTGAAAAAATTAAAGTTGGTTGATTGGATCCAAAAACTAGGCCTTGCCAACCATTTTCAAACGGAAATAAATGGCTTTCTTGAATCTATAGCAGTTTATGTCAAAACCAGCAATCTTAATCTTAGTTCAGAACATTTGCACGTATCTGCATTATGCTTCAGGCTTCTAAGAAATCACGGATATGCAGTTTTGCCCGATATATTAAGCAAGTTCTTAGATAAAAAGGGTGAAGTGATGAGGACAATTAGCTCACATGTTGGTGATGCTAAAGATGTCGTGGAGCTTTTGGAGGCCTCACATTTAGGCTTGGAAGGAGAAAAGATATTGGATGAGGCAAAAATTTGTGCCACAAATTCTCTCAAGGATACTTTCTCTCTCAGTTCCATCAACAAGGACCAACTAAATAATAATGATGCTGAGAGAATGGTCCACTCACTGGAGCTTCCCTCCCATTGGAGAGTACAATGGTTTGAAGTTAAATGGCAAATCAAGCAATACAACAAGGAGAAAAATAAGGACCTCATTTTACTTGAACTGTCTAAATTAAATTTCAATATGATTCAGGCCACACTTCAAATGGAGCTCAAGGAATTATCCAGGTGGTGGGAGAATCTTAGCATAAAAGAAGAACTGAGCTTTGCAAGGAATAGGTTGGTTGAAGGCTTCATGTGTGCAGCAGGAGTTGCTTTTGAGCCCAAGTACAAATCCATCAGAAAATGGCTCACCAAAGTTATTGTTTTCGTACTAGTCATTGATGATGTTTATGATATACATGCCTCATTTGAAGAGTTGAAGCCCTTCACAATGGCGTTTGAGAGATGGGACGACACAGAACTAGAAGAACTTCCAACGTACATGAGAACATGTGTCCATGCACTTCAAGATGTCACAAATGAAATTGCTTATGAAATTGGAGGAGAAAATAACTTTCACTTGGTGTTAACTTACCTAAAGAAAGCGTGGATAGAGTTTTGCAAAGCATTATACGAGGAGGCAAAGTGGTACAACAAGGGATACATTCCATCCTTGCAAGAATATTTAAGCAATGCATGGATTTCATCTTCTGGGCCTGTAATTTTATTGCATTCATATCTTGGTACAATGTATCAAGTTAAAGATTCCATGGACCATTTTCTACAGACGTACGAGGATTTGGTGTACAATGTATCCCTTGTGATTAGTCTTAGCAACGATTTAGGAACCAGTGTGGCTGAAAGAGAAAGGGGTGATGCAGCTTCGTCAATCGTATGCTATATGAATGAAAAGGGTGTTTCAGAGGAAAAAGCAAGAAAGCATATCCAAGATAAAATCCTTGAAGCATGGAAGAAGATAAACAAGAAGTGCTTTGCTTCTTCTTCTTCTTGCTGTGTGGAGCCATTTGTTACTCAAGCAATAAACGCAGCTCGTGTATCCCATACCCTTTATCAAAATGGAGATGGTTTTGGAATCCAAGATCAAGATATCAAAAAACATATCTTGTCACTAGTTGTTGAACCCCTTTAA 1731 0.379 MQKEHHHFLHFCKMNQPNFSVSSQILSRRSANYKPNIWKYQFLQSLGSKYHKDEFATLLNKRMLEVKSLFLQEEDILKKLKLVDWIQKLGLANHFQTEINGFLESIAVYVKTSNLNLSSEHLHVSALCFRLLRNHGYAVLPDILSKFLDKKGEVMRTISSHVGDAKDVVELLEASHLGLEGEKILDEAKICATNSLKDTFSLSSINKDQLNNNDAERMVHSLELPSHWRVQWFEVKWQIKQYNKEKNKDLILLELSKLNFNMIQATLQMELKELSRWWENLSIKEELSFARNRLVEGFMCAAGVAFEPKYKSIRKWLTKVIVFVLVIDDVYDIHASFEELKPFTMAFERWDDTELEELPTYMRTCVHALQDVTNEIAYEIGGENNFHLVLTYLKKAWIEFCKALYEEAKWYNKGYIPSLQEYLSNAWISSSGPVILLHSYLGTMYQVKDSMDHFLQTYEDLVYNVSLVISLSNDLGTSVAERERGDAASSIVCYMNEKGVSEEKARKHIQDKILEAWKKINKKCFASSSSCCVEPFVTQAINAARVSHTLYQNGDGFGIQDQDIKKHILSLVVEPL 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00167 576 Pfam Terpene synthase family, metal binding domain 253 519 IPR005630 GO:0000287|GO:0010333|GO:0016829
Phco9g00167 576 Gene3D - 74 248 IPR036965 GO:0010333|GO:0016829
Phco9g00167 576 SFLD Isoprenoid Synthase Type I 252 575 - -
Phco9g00167 576 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 34 246 IPR008930 -
Phco9g00167 576 PANTHER OS04G0344100 PROTEIN-RELATED 27 556 - -
Phco9g00167 576 SUPERFAMILY Terpenoid synthases 251 576 IPR008949 -
Phco9g00167 576 CDD Terpene_cyclase_plant_C1 28 575 IPR044814 GO:0010333|GO:0016102
Phco9g00167 576 FunFam Isoprene synthase, chloroplastic 225 566 - -
Phco9g00167 576 Gene3D Farnesyl Diphosphate Synthase 35 566 IPR008949 -
Phco9g00167 576 Pfam Terpene synthase, N-terminal domain 37 204 IPR001906 GO:0010333|GO:0016829
Phco9g00167 576 SFLD Terpene Cyclase Like 1 C Terminal Domain 252 575 IPR034741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00167 Phco-Chr9 1086656 1090039 Transposed