Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00160 ATGGAGTACCTCTACCTTTCTTGCAGAGCCGAATCCGCAGTTTCAACCTCCGATTCGGTGTCTTCTTCCAAACCAACCAAAGAGAAAGATAAAGAGAAAGAGAAAGAGAGAAGCAGCATCAAGATCCAAGAGTTTCAGTACAGCGACCTCGAAGCTGCCACCAATGGCTTTTCCGACCGCAAGCTCCTCGGCAAAGGGAGCCACGGCTATGTCTACAAGGCGGTGGTTCGCGGCCGTCCCGTGGCGGTGAAGCGTCCGTCGCGGTCACACCATCACGGGGTTGTTCCTCGACCTGTGTCTTCCTCCGCGCCGCTGGAGATCACCAACGAGGTGGACAACGAGATCGACATCTTGTCGAAAATCCAGAGCCCCAGGTTGGTGAATTTGGTGGGTTTCACGAACGATTCAAGAGACAGGCTTTTGGTGGTGGAGTTCATGAGCAATGGCACCCTTTACGATGTTCTTCATTCCTCTCCCAGGACTCCCAATTGGGGTAGGAGGATTCGTTTGGTTCTGCAAACTGCAAAAGCCATTGACACTCTTCACTCCTCGACCCCTCCTGTGATTCACCGTGACATAAAGTCTGCTAACGTTCTCATCGACCGCAGCTACAATGCGAGATTGGGTGATTTCGGTTTGGCTTTAAGAGGCCATGTTGATGACTACAGACTCAGGTCCACTCCCCCTGCTGGCACCATGGGCTATCTTGACCCTTGTTATGTCACTCCGGATAATTTGAGCACTAAAACTGATGTTTTTAGCTTTGGGATTTTGCTGTTGGAGATTATAAGCGGAAGGAAGGCCATTGATATCACTTATTCACCACCTTCCATCGTGGATTGGGCTATTCCTCTCATTAAGAAAGGGAAGTTGTTGGCTGTTTATGATCCCAGAATTGCACCTCCCAAGGATCCGGTTGTGAGGAAGCAGTTGGCTGTGATTGCTGCCAAGTGTGTGAGGTCTTGCAGGGAGAGGAGACCTTCCATGAAGGAGGTTGTTACTTGGCTCTGTGGGCTGTGTAAACTGGTGCCTCTTCATTCGTGGAATGGTTTTAACAACCCTTGCATGATGGTTGAGACTGTGGGGCGCCCTGTTGAAGCAAGAAATGGTCAATTCAGTTCTAGGCTTGCAAGCGTGGAGGAGGGAAATTTTGATGCTTTGGATGCAAGGTTGTCCAAGTCTGCAATGAGGTATTCCCGGAGGGTGTATTCTGATTTGGGGTTCAGCAGCAACTTGATGGACTTGATGGCTACCACTGAGGAGCCTGAATTTCTGAGAGATGCTGATGGGGTGGGGCATGGTTCTAAATCTGCTGAACAAGTTTCTAGCTCCAGGTTTGGCAGTGGAAGATATTCCATAAGAGGCAGGAACCTGTACCGGCCATGTGGCAGTGACAAGGACGCGTTTGGCTTGAGTAAAGGCCAGATTGTAGGTCAGAGTGAGACCGCTTCAAAACAGGATGGGGTTTCTGGTTCAAATTCGAAGAATTTGAATTCTCTGGCTGTTGCTGAGGTTGTCTAG 1521 0.4984 MEYLYLSCRAESAVSTSDSVSSSKPTKEKDKEKEKERSSIKIQEFQYSDLEAATNGFSDRKLLGKGSHGYVYKAVVRGRPVAVKRPSRSHHHGVVPRPVSSSAPLEITNEVDNEIDILSKIQSPRLVNLVGFTNDSRDRLLVVEFMSNGTLYDVLHSSPRTPNWGRRIRLVLQTAKAIDTLHSSTPPVIHRDIKSANVLIDRSYNARLGDFGLALRGHVDDYRLRSTPPAGTMGYLDPCYVTPDNLSTKTDVFSFGILLLEIISGRKAIDITYSPPSIVDWAIPLIKKGKLLAVYDPRIAPPKDPVVRKQLAVIAAKCVRSCRERRPSMKEVVTWLCGLCKLVPLHSWNGFNNPCMMVETVGRPVEARNGQFSSRLASVEEGNFDALDARLSKSAMRYSRRVYSDLGFSSNLMDLMATTEEPEFLRDADGVGHGSKSAEQVSSSRFGSGRYSIRGRNLYRPCGSDKDAFGLSKGQIVGQSETASKQDGVSGSNSKNLNSLAVAEVV 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00160 506 Pfam Protein kinase domain 58 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00160 506 ProSitePatterns Protein kinases ATP-binding region signature. 63 84 IPR017441 GO:0005524
Phco9g00160 506 ProSiteProfiles Protein kinase domain profile. 57 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00160 506 FunFam Serine/threonine-protein kinase-like protein At1g28390 26 145 - -
Phco9g00160 506 PANTHER OS01G0253100 PROTEIN 20 338 - -
Phco9g00160 506 FunFam Serine/threonine-protein kinase-like protein 146 349 - -
Phco9g00160 506 SUPERFAMILY Protein kinase-like (PK-like) 38 336 IPR011009 -
Phco9g00160 506 SMART serkin_6 57 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00160 506 MobiDBLite consensus disorder prediction 23 39 - -
Phco9g00160 506 MobiDBLite consensus disorder prediction 12 39 - -
Phco9g00160 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Phco9g00160 506 Gene3D Phosphorylase Kinase; domain 1 26 145 - -
Phco9g00160 506 Gene3D Transferase(Phosphotransferase) domain 1 146 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00160 Phco-Chr9 1060037 1061557 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Phco9g00160 Pkinase 2.2e-36 CL0016