Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00146 ATGATACCTGTGTTGGCGATGGAAAATGATTTTGTAAAGGGTCTGCAGCCACCCATGGCGTCCTTTTCTGCCGCCGTAACTAACTTCTCCGGCATTTCGCCGTCTCGGACTTCGCTCTATCCTCGCCACAAGCTTTTCCAAGCTCAATGCCGCCCTTTCTTCCTCTCGCGCTCTTCCCATTTCCTTCTGTTAATGAAGGATCTTACTTTACCACGGAGAAGAAAAACACCAGACACCACAATATGCGCTTCATTCACTGATGTTACATCAAATGTGGCTTTGGAGGAAAAGCTACCTCCCAAAGGAGAAACCTGGTCTGTGCACAAATTTGGTGGAACCTGCGTGGGAACCTCACAGAGAATAAAGAATGTTGCAGAAATAATTGTTAAAGATGATTCAGAGAGAAAATTAGTGGTTGTCTCTGCAATGTCAAAGGTGACAGATATGATGTATGCCCTTATTCACAAGGCTCAATCACGCGATGAGTCTTATATATCTTCATTGGATGCTGTTTTGGAGAAGCATAGTGCAACTGCACATGACATTCTGGAGGGAGATAATCTTGCTAGTTTCTTGTCTAAGTTGCAGAATGATATTAGTAATCTGAAGGCGATGCTTCGAGCAATATACATAGCTGGTCATGCAACAGAGTCCTTTACAGATTTTGTTGTGGGACATGGGGAATTATGGTCTGCTCAGATGTTGTCTCTAGTTATTAGAAAGAATGGGATTGATTGCAAATGGATGGATACAAGGGATGTCATTATTGTAAATCCTTCTGGTTCTAATCAAGTTGATCCTGACTATTTGGAGTCTGAGCAAAGACTTGAAAAATGGTACTCTTTGAATCCATGTAAGGTAATCATTGCTACTGGATTCATTGCAAGCACACCTCAAAACATTCCTACCACATTGAAGAGAGATGGAAGTGACTTCTCAGCAGCAATTATGGGTGCTCTATTCAGGGCTCGTCAAGTCACAATTTGGACAGATGTGGATGGTGTGTATAGCGCTGATCCCAGAAAAGTTAGCGAGGCTGTGATTTTGAAGACATTGTCTTATCAAGAGGCATGGGAAATGTCTTATTTTGGTGCAAATGTCTTGCATCCCCGCACAATTATTCCTGTGATGAGATATGGCATACCCATTATGATAAGGAACATTTTCAACCTTTCTGCTCCTGGAACAAAGATCTGCCACCCTTCTGTTAATGATCATGAAGATATACAGAACCTGCAAAATTATGTCAAAGGATTTGCAACCATAGACAACTTGGCACTCGTAAATGTTGAGGGAACTGGAATGGCTGGTGTTCCAGGTACAGCCAGTGCTATTTTTGGTGCGGTAAAAGATGTTGGAGCTAATGTTATAATGATATCTCAGGCTAGTAGTGAGCATTCTGTATGCTTTGCTGTCCCTGAGAAAGAAGTAAAAGCTGTTGCTGAGGCATTGCAATCAAGATTTCGACAAGCTTTGGATAATGGGCGTCTTTCTCAGGTTGCAATTATTCCAAATTGTAGCATTCTAGCTGCAGTTGGCCAGAAGATGGCAAGCACCCCTGGTGTTAGCGCCTCCCTTTTTAATGCATTGGCTAAGGCCAATATAAATGTCCGTGCTATAGCACAAGGTTGTTCTGAGTACAATATTACTGTTGTTGTGAAGCGAGAGGATTGTATAAAGGCTTTGCGAGCTGTCCATTCCAGATTTTATCTCTCAAGAACCACCATATCAATGGGCATTATTGGACCTGGATTAATTGGAAGTACACTACTGGACCAGCTAAGGGATCAGGCATCAACCCTGAAAGAAGAATTCAACATTGATTTGCGTGTAATGGGCATACTTGGTTCAAAGTCAATGCTGCTTAGTGATGCGGGCATTGACTTAGCTATATGGAGAGAACTTCGAGAGGAAAGAGGAGAAGCGGCTGATTTGGAAAAATTTGTTCAGCATGTACATGGAAATCATTTTATACCCAACACAGCACTAGTTGACTGCACAGCTGACTCTGTCATTGCTGGCTATTACTATGAGTGGTTGCGCAAAGGAATACACGTAGTTACTCCTAACAAGAAAGCAAATTCAGGACCACTTGAGCAGTATTTGAGGTTAAGAGCTCTTCAAAGGCAATCCTACACACACTACTTCTATGAAGCTACGGTTGGGGCTGGTCTTCCCATTGTCAGTACTTTACGTGGCCTCCTTGAAACTGGAGACAGAATATTGCAAATTGAAGGCATATTTAGTGGGACTTTGAGTTACATATTTAATAACTTCAAAGATGGCCGGGCTTTTAGTGAGGTAGTTGCTGAAGCAAAGGAAGCTGGTTATACTGAGCCAGATCCAAGAGATGATCTGTCTGGAACAGATGTTGCTCGAAAGGTTATAATTCTTGCTAGGGAATCTGGATTAAAGCTAGAACTATCTAATATTCCAGTTGAAAGCCTTGTGCCAGAACCACTACAAGTTTGTGCATCAGCTCAGGAGTTTATGCAAGATCTACCAAAATTTGATCAGGACTTCACAAAGAAACAAGAAGATGCAGAGAATGCTGGGGAAGTGTTGAGATATGTGGGAGTGGTGGACGTGATTAATAGAAAAGGAGTGGTAGAGCTGCGAAGATACAAGAAGGATCATCCATTTGCACAATTATCTGGATCGGATAATATTATTGCATTTACAACAAGAAGGTATAAGGATCAGCCTATGATAGTTCGTGGCCCAGGAGCTGGTGCTCAAGTCACAGCTGGTGGAATATTTTCTGATATTTTACGTCTTGCTTCGTATCTTGGTGCTCCATCTTAA 2805 0.421 MIPVLAMENDFVKGLQPPMASFSAAVTNFSGISPSRTSLYPRHKLFQAQCRPFFLSRSSHFLLLMKDLTLPRRRKTPDTTICASFTDVTSNVALEEKLPPKGETWSVHKFGGTCVGTSQRIKNVAEIIVKDDSERKLVVVSAMSKVTDMMYALIHKAQSRDESYISSLDAVLEKHSATAHDILEGDNLASFLSKLQNDISNLKAMLRAIYIAGHATESFTDFVVGHGELWSAQMLSLVIRKNGIDCKWMDTRDVIIVNPSGSNQVDPDYLESEQRLEKWYSLNPCKVIIATGFIASTPQNIPTTLKRDGSDFSAAIMGALFRARQVTIWTDVDGVYSADPRKVSEAVILKTLSYQEAWEMSYFGANVLHPRTIIPVMRYGIPIMIRNIFNLSAPGTKICHPSVNDHEDIQNLQNYVKGFATIDNLALVNVEGTGMAGVPGTASAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALQSRFRQALDNGRLSQVAIIPNCSILAAVGQKMASTPGVSASLFNALAKANINVRAIAQGCSEYNITVVVKREDCIKALRAVHSRFYLSRTTISMGIIGPGLIGSTLLDQLRDQASTLKEEFNIDLRVMGILGSKSMLLSDAGIDLAIWRELREERGEAADLEKFVQHVHGNHFIPNTALVDCTADSVIAGYYYEWLRKGIHVVTPNKKANSGPLEQYLRLRALQRQSYTHYFYEATVGAGLPIVSTLRGLLETGDRILQIEGIFSGTLSYIFNNFKDGRAFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSNIPVESLVPEPLQVCASAQEFMQDLPKFDQDFTKKQEDAENAGEVLRYVGVVDVINRKGVVELRRYKKDHPFAQLSGSDNIIAFTTRRYKDQPMIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00146 934 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 577 753 - -
Phco9g00146 934 CDD AAK_AK-HSDH 105 399 IPR041743 -
Phco9g00146 934 Gene3D - 412 571 - -
Phco9g00146 934 ProSitePatterns Aspartokinase signature. 107 115 IPR018042 GO:0004072|GO:0008652
Phco9g00146 934 Pfam Homoserine dehydrogenase 726 924 IPR001342 GO:0006520
Phco9g00146 934 Pfam ACT domain 504 567 IPR027795 -
Phco9g00146 934 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 726 911 - -
Phco9g00146 934 ProSitePatterns Homoserine dehydrogenase signature. 772 794 IPR019811 GO:0006520
Phco9g00146 934 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 413 571 - -
Phco9g00146 934 Gene3D - 576 926 - -
Phco9g00146 934 ProSiteProfiles ACT domain profile. 511 588 IPR002912 -
Phco9g00146 934 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 737 908 - -
Phco9g00146 934 Gene3D Dihydrodipicolinate Reductase; domain 2 737 908 - -
Phco9g00146 934 PANTHER - 94 934 IPR011147 GO:0004072|GO:0004412|GO:0009067
Phco9g00146 934 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 574 748 IPR036291 -
Phco9g00146 934 SUPERFAMILY ACT-like 414 489 IPR045865 -
Phco9g00146 934 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 104 401 - -
Phco9g00146 934 ProSiteProfiles ACT domain profile. 430 505 IPR002912 -
Phco9g00146 934 Pfam ACT domain 434 488 IPR002912 -
Phco9g00146 934 CDD ACT_AKi-HSDH-ThrA-like_1 425 504 - -
Phco9g00146 934 CDD ACT_AKi-HSDH-ThrA_2 506 571 - -
Phco9g00146 934 SUPERFAMILY Carbamate kinase-like 106 400 IPR036393 -
Phco9g00146 934 Gene3D - 105 401 IPR036393 -
Phco9g00146 934 Pfam Amino acid kinase family 106 387 IPR001048 -
Phco9g00146 934 Pfam Homoserine dehydrogenase, NAD binding domain 582 718 IPR005106 GO:0016491|GO:0050661
Phco9g00146 934 NCBIfam aspartate kinase 105 569 IPR001341 GO:0004072|GO:0008652
Phco9g00146 934 SUPERFAMILY ACT-like 493 584 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00146 Phco-Chr9 969904 985429 Dispersed