Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00134 ATGAAACCTTTTCTTCTCTTTCTCACATTCTCCTTCCTCTGCCAAACACACCAACTCCCACTTCTCTCTGCCACAACCCTGCCTCTCCAACTCATCTCCCTCCTCTCAATAAAATCATCCCTCCAAGACCCTCTCAATAACCTCCATGACTGGGACCCCTCCCCCACCTTCTCCAGCTCCAATCCCCAACTCCCAATATGGTGCTCATGGAGAGCCATCACGTGCCACTCCAAAACATCACAAATCACCACCCTCGACCTCTCCCACCTCAATCTCTCCGGCACAATCTCTCCCCAAATCCGCCACCTATCCACCTTAAACCACCTTAACCTCAGTGGAAATGACTTCAGCGGGAGTTTCCAGTACGCCATTTTCGAACTAGCAGAACTGAGAACTCTAGACATCAGCCACAACTACTTCAACTCAACCTTCCCACCCGGCACATCAAAGCTCAAGTTCCTCAGGCACTTCAACGCCTACAGCAACAGCTTCACTGGACCCCTCCCCCAAGAGTTAACCAGCCTTCGTTTTCTGGAACACCTGAACCTCGGCGGAAGCTACTTCAGTGACAGGATTCCACCAAGTTACGGCACTTTTCCGAGACTCAAGTTTCTAGACTTAGCCGGCAACGCCTTGGGAGGTCCGCTTCCACCCCAATTAGGTCACTTGGCTGAACTGGAACACTTGGAAATTGGATACAACAATTTCTCAGGAACACTACCTTCTGAACTCTCATTGCTCTCTAATCTCAAATACTTGGACATCTCAACTGCTAACATCTCCGGGAACGTGATTCCGGAGCTGGGAGACCTCACCAACCTGGAGACACTTTTGCTGTTCAAGAACAGGTTAACAGGAGAAATCCCACCAACCATAGGAGGATTGAAGTCGCTTAAAAGCCTTGACCTCTCAGATAACCAACTCACAGGGCCAATCCCCACCCAAGTCACCATGCTAACGGAACTAACCACGCTCAACCTCATGGAAAACAACCTGACCGGAGAAATACCACAGGGAATTGGAGACCTACCAAAGCTAGAGATTTTGTTCCTCTTCAACAACTCACTCACCGGAATCCTCCCTCAGCAACTAGGCTCCAACGGGTTACTACTGAAACTAGACGTTTCCACAAACTCACTCGAAGGTCCAATCCCTGAAAATGTCTGCAAAGGTAACAAGCTCGTAAGACTCATACTCTTTCTCAACAACTTCAGTCATACCCTTCCACCATCCCTTGCCAGCTGCACCTCACTCGCCAGGGTTCGCATCCAAAACAATTTCCTCAACGGTTCAATCCCCGAAGGCCTCACGCTCCTCCCTAACCTTACATTCCTAGATATCAGCAGCAACAACTTCCAGGGTCAAATTCCGGAGAGCTTAGGTAACTTGCAGTACTTCAACATCTCCGGAAACTCCTTCGGAACCTCCTTACCGGCATCCATTTGGAATGCAACTAATCTCGCGATCTTCTCCGCGGCTTCGTCGAACATCACCGGTCAAATTCCAGATTTCATTGGGTGCCAGCAGCTGTATAAGCTCGAATTGCAGGGAAATTTCATCAACGGTACGATTCCGTGGGACATTGGACACTGCCAAAAGCTGATTTTACTCAATCTGAGTCGAAACTCACTCACCGGAATAATTCCCTGGGAAATCTCTGCTCTCCCTTCCATTACCGACGTTGATCTCTCTCACAATTCCCTCACCGGAACCATTCCATCGAACTTCAACAACTGCTCCACGCTCGAGAATTTCAACGTCAGTTTCAACTCCCTCACCGGTCCAATTCCATCCTCCGGCATCTTCCCAAACCTCCATCCTTCTTCCTACTCCGGGAACCAGGGCCTCTGCGGCGGCGTGTTGGCCAAACCATGCGCTGCGGACGCCCTCGCCGCCGCCGATGACCAGGTCGACGTCCGCCGCCAGCAGCCGAAGCGAACAGCCGGTGCAATCGTGTGGATCGTGGCCGCCGCGTTCGGCATCGGGCTCTTTGTGCTGGTGGCCGGCACGCGGTGCTTCCACGCAAACTACAACCGGCGGTTCGGAGAGGAGGTCGGGCCGTGGAAGTTAACGGCGTTCCAGCGGCTGAATTTCACGGCGGAGGACGTGCTGGAGTGTTTGTCGATCTCCGATAAGATACTAGGCATGGGATCGACCGGAACAGTTTACCGTGCTGAAATGGCAGGTGGCGAGATCATAGCGGTTAAGAAGCTGTGGGGAAAACAGAAGGAGAATATCCGCCGGAGAAGAGGCGTTCTGGCTGAGGTGGAGGTGTTGGGAAACGTGAGGCACAGGAATATCGTGAGGTTGTTAGGGTGCTGCAGCAACAGAGAGTGCACAATGCTGCTTTACGAGTACATGCCCAATGGCAACTTGGATGATTTGTTGCATGCCAAAAACAAAGGTGATAATCTCGTCGCTGATTGGTTCACCAGGTACAAGATCGCCTTGGGCGTTGCTCAGGGAATCTCCTATCTTCACCACGACTGCGACCCCGTCATCGTCCACCGCGATCTCAAACCCAGTAACATTCTATTGGACGCTGAGATGGAGGCAAGAGTCGCTGATTTCGGAGTCGCCAAGTTGATTCAGACCGACGAATCCATGTCTGTCATTGCCGGATCCTACGGCTACATTGCTCCAGAATATGCTTACACCCTTCAAGTGGATGAGAAGAGTGACATTTACAGCTATGGGGTAGTGTTGATGGAGATCCTGAGCGGAAAACGTTCTGTGGAAGCAGGTTTTGGAGATGGGAACAGCATAGTGGATTGGGTGAGGTCAAAGATAAAGTCAAAAGATGGGATTGATGAGATATTGGACAAGAATGCAGGGGCAGGGTGCAGGTCAGTGAAAGAAGAGATGATACAGATGCTCAGAATTGCATTGCTTTGCACCAGTAGAAACCCTGCAGACAGACCTTCTATGAGGGATGTTGTGTTGATGCTGCAGGAGGCCAAGCCAAAGAGGAAATTGCTGGATGGTGTTGCAGTTGGTGGCTGTGGAGGAGACAATGTGCTTGCTGCTCCTCACATTCCCTTCCCACAAAAACCAGTTGCAGACCAATGCTAA 3072 0.5104 MKPFLLFLTFSFLCQTHQLPLLSATTLPLQLISLLSIKSSLQDPLNNLHDWDPSPTFSSSNPQLPIWCSWRAITCHSKTSQITTLDLSHLNLSGTISPQIRHLSTLNHLNLSGNDFSGSFQYAIFELAELRTLDISHNYFNSTFPPGTSKLKFLRHFNAYSNSFTGPLPQELTSLRFLEHLNLGGSYFSDRIPPSYGTFPRLKFLDLAGNALGGPLPPQLGHLAELEHLEIGYNNFSGTLPSELSLLSNLKYLDISTANISGNVIPELGDLTNLETLLLFKNRLTGEIPPTIGGLKSLKSLDLSDNQLTGPIPTQVTMLTELTTLNLMENNLTGEIPQGIGDLPKLEILFLFNNSLTGILPQQLGSNGLLLKLDVSTNSLEGPIPENVCKGNKLVRLILFLNNFSHTLPPSLASCTSLARVRIQNNFLNGSIPEGLTLLPNLTFLDISSNNFQGQIPESLGNLQYFNISGNSFGTSLPASIWNATNLAIFSAASSNITGQIPDFIGCQQLYKLELQGNFINGTIPWDIGHCQKLILLNLSRNSLTGIIPWEISALPSITDVDLSHNSLTGTIPSNFNNCSTLENFNVSFNSLTGPIPSSGIFPNLHPSSYSGNQGLCGGVLAKPCAADALAAADDQVDVRRQQPKRTAGAIVWIVAAAFGIGLFVLVAGTRCFHANYNRRFGEEVGPWKLTAFQRLNFTAEDVLECLSISDKILGMGSTGTVYRAEMAGGEIIAVKKLWGKQKENIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGDNLVADWFTRYKIALGVAQGISYLHHDCDPVIVHRDLKPSNILLDAEMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVEAGFGDGNSIVDWVRSKIKSKDGIDEILDKNAGAGCRSVKEEMIQMLRIALLCTSRNPADRPSMRDVVLMLQEAKPKRKLLDGVAVGGCGGDNVLAAPHIPFPQKPVADQC 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00134 1023 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 200 985 - -
Phco9g00134 1023 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 677 786 - -
Phco9g00134 1023 SUPERFAMILY RNI-like 85 405 - -
Phco9g00134 1023 Gene3D Ribonuclease Inhibitor 75 340 IPR032675 -
Phco9g00134 1023 Gene3D Ribonuclease Inhibitor 341 632 IPR032675 -
Phco9g00134 1023 FunFam LRR receptor-like serine/threonine-protein kinase EFR 340 631 - -
Phco9g00134 1023 SUPERFAMILY L domain-like 313 617 - -
Phco9g00134 1023 SMART LRR_typ_2 343 366 IPR003591 -
Phco9g00134 1023 SMART LRR_typ_2 555 578 IPR003591 -
Phco9g00134 1023 SMART LRR_typ_2 439 463 IPR003591 -
Phco9g00134 1023 SMART LRR_typ_2 127 151 IPR003591 -
Phco9g00134 1023 SMART LRR_typ_2 271 294 IPR003591 -
Phco9g00134 1023 SMART LRR_typ_2 295 319 IPR003591 -
Phco9g00134 1023 SMART LRR_typ_2 199 223 IPR003591 -
Phco9g00134 1023 Pfam Leucine rich repeat N-terminal domain 30 75 IPR013210 -
Phco9g00134 1023 Pfam Leucine Rich Repeat 441 463 IPR001611 GO:0005515
Phco9g00134 1023 Gene3D Transferase(Phosphotransferase) domain 1 787 995 - -
Phco9g00134 1023 Pfam Leucine Rich repeats (2 copies) 272 308 IPR025875 -
Phco9g00134 1023 FunFam leucine-rich repeat receptor-like protein kinase TDR 787 994 - -
Phco9g00134 1023 SMART serkin_6 708 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00134 1023 ProSitePatterns Protein kinases ATP-binding region signature. 714 737 IPR017441 GO:0005524
Phco9g00134 1023 Pfam Leucine rich repeat 509 568 IPR001611 GO:0005515
Phco9g00134 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Phco9g00134 1023 ProSiteProfiles Protein kinase domain profile. 708 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00134 1023 SUPERFAMILY Protein kinase-like (PK-like) 711 983 IPR011009 -
Phco9g00134 1023 Pfam Protein kinase domain 711 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00134 1023 Gene3D Phosphorylase Kinase; domain 1 691 786 - -
Phco9g00134 1023 FunFam Leucine-rich repeat receptor-like protein kinase TDR isoform A 85 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00134 Phco-Chr9 887501 891059 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phco9g00134 Pkinase 6.4e-48 CL0016