Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00085 ATGTCGTCCAACCCTCCCCCGCCGCATTCTTCGCACAAACCCGGCAAAGACCATTCTGCTGCGACGGCGATACCGTCATCGCCTTCCAGCAGAGCTAAACTCCGGAAGATCCCGCCCATTCCGATTCGACGGAGTAAGTTAGGCAATGAGGAGCAGGAAGAAGAGGAAGATGAACGCTCTGATTCTTCTTCCATCTTGCTTGCCTCCTCTTTAGGGCTGAATAACATTCGAACACGTTCTTCCTCTTCGCCTCTTCGCTATTCCTCCTCCGTTGGTGCTCCTTCCTTCCTCACACAGAATGCTATCACTATCAATGACGCCAGATTTGGATCCAGATCTAATTCCCATCCAAAAAAAGACCTAGGGGGAAGAATTCATTTTAATCAATTCAAATCGCTCAAAGATCATTCGCAACTCATTCCTGTGCTAGAGGGTCATCATGCAGCTTTCGCCAAAGAAATGCAATCCCCACGTTTTCAGGAAATTCTGCGACTTACTAGTGGACGCAAAAAGAGAAACCCTGATATCAAAAGCTTTTCTCATGAACTCAACTCCAAGGGAGTAAGACCATTTCCAATCTGGAAGCATCGTGCCTTTGGCCACTTGGAGGAAGTCATGTCGGCGATTAGAGCTAAGTTTGAAAAATTTAAGGAAGAAGTTGATTCTGACTTGGGTGGTTTCGCTGGAGATTTGGTGGGTATTCTTGAAAAAAACTTAGTGTGTGATCGTGAATGGAGAGAGAAGTTGGAGGATCTGTTGGTCGTTGCTCAACAATGTGCAAAGATGTCTCCTACCCAGTTTTGGATCAAATGCGAATCTATTGTTCAAAATCTAGATGACAAACGTCAAGAATTACCCGTGGGGATACTCAAGCAAGCTCATACACGCCTACTGTTTATTCTCACTCGTTGCACTCGATTAGTACAATTTCAGAAGGAAAGCGGATTTGAACAAGACCACATTCTGGGTCTTCACCAACTCAGCGACCTGGGGGTCTATCCTGAGCAAATTTTGAAGGCTGCACAGCAGAATTCAAGTATTCCACTCGCCGGACACGAGACGGCTGAGAAACAGTTAAAAATGTTACATAGTAAAGAGAAAGAAAAACCGAAAACTACAAAGAGTAAAGCTGACCAACAAGTAAGTGTTGCGATTGACAACCCAGAGGTTGCTCCGGTCAAGAGTGTTGAATCAACTTCTGGCAGCTATAGGATGTCTTCTTGGAGAAAGTTTCCATCTGCTGCTGAGAGAAAGCGAAAAGGTCAAGATGCTGTGGATACCCCATCCAAAGGTGAAATGGACCACTTGCTAGTCAAAGATGAAAATGCTGAAAATTTGGACACTTCCTCTTGTCATCCTGAACATTCACAATCATCATCAAGAACGCGAAAGGTTTCTTGGGGATTCTGGGGAGACCAGCAAAATCTTACATACGACGATTCAATGATATGCAGGATTTGTGAGGTTGAAATACCGATTGTACATGTGGAGGAGCATTCAAGAATATGCACAATTGCGGATAGATGTGATTTGAAAGGTTTAACTGTAAACGAGCGGCTTGAAAGAGTTTCTGAAACCATTGAAAGGATACTGGAATCATGGACACCAAAAAGCACACCGAAAAGCACTGATACTCCTGGAGAAAGCTTTGACCTTGCCGCTTCAAATGTGCTTGAAGAGTTCAGCGATTTATCTCTAGAGAGAAATAACATGAGTTGTAGATGCTCTGAAGACATGCTCGACTCTACTACGGAGCCTGACAATACTTTTGTCATGGACGATCTGAACTTTTCACCCAGAATATCATGCGAAGCACGCATCTTCATAAAACCTGATCATGGAACAAAGGTATCTTCAGCTGGGAGCTTGACACCGAGATCACCATTGGTAACACCACGAACCACTCAATTGGAAATGTTACTAAGTGGACGGAGAACACTGTCTGAACTTGAAAGTTGTGACCAGATAAGCAGGCTAGTTGAAATAGCCCGTGCTGTTGCAAATGTGAACAACTGTGACTACAGTGCTCTGGAGTATATGCTTGATCGCTTAGAAGACTTGAAATATGCCATTCAAGACAGAAAAGTGGATGCACTTATTGTGGAGACTTTTGGACGACGAATAGAGAACCTTTTGCAGGAGAAATATATATCTCTTTGCGGGCAGATAGAAGATGAAAAGGTGGACTCATCAACTAGCGTAGCTGACGAAGAGAGTTCAGTGGAAGATGATACAGTTCGTAGCCTTCGTGCTAGCCCTATTAATGCTTGTTCCAAGGACCGAACCACTATTGAGGACTTTGAAATAATGCAACCCATAAGTAGGGGTGCATTTGGACGAGTTTTTCTTGCCAAAAAGAAAATAACTGGTGATTTATTTGCCATAAAGGTTCTGAAAAAGGCAGATATGATCCGTAAAAATGCAGTTCAAAGTATTTTGGCAGAGCGAGACATACTTATATCTGTTCGAAATCCTTTTGTGGTCCGATTTTTCTACTCTTTCACATGTCGGGAAAATCTTTATCTAGTTATGGAGTATTTGAATGGTGGAGATCTTTATTCAATGTTGAGAAATCTAGGTTGTTTAGATGAAAATATGGCTCGAGTATATATTGCAGAAGTTGTTCTTGCATTGGAGTATTTGCATTCCTTAAATGTGATTCACAGAGACTTGAAGCCAGATAACTTACTGATTGGTCAAGATGGCCATATCAAGCTGACAGATTTCGGGCTCTCTAAGGTTGGTCTTATTAACAGCACAGATGATTTATCAGCGCCATCATTTTCGGCCATCCTAGAAGACGATGAACCAAAACCTACACATTCTTTCAAACGGGAAGAGCGTCAAAGACAATCAGTGGTTGGCACTCCGGATTACTTGGCACCTGAAATACTTCTTGGAATGGGACATGGTGTAACTGCTGATTGGTGGTCTGTGGGTGTCATACTGTATGAGCTTCTTGTGGGTATTCCACCATTTAATGCTGAACATCCACAGCAAATTTTTGATAACATAATTAACAGAGACATACAATGGCCCAAGATTCCTGATGAGATCAGCTTTGAAGCATATGATTTGATAAATAAATTATTGAACGAAAATCCAGTACAAAGATTAGGCGCAACAGGAGCTACAGAAGTTAAACGCCACGCCTTCTTCAAAGATATTAATTGGGATACACTAGCAAGGCAGAAGGCTATGTTTATTCCATCGGCTGAAGCTCTTGATACAAGTTATTTTATGAGCCGGTACGTATGGAATCCCGAGGACGAACATTGTCTCGGAGTTAGTGATTTTGATGAGATTACTGAAACATGCAGCAGTGGTTCAGGAAGCGATATGCTAGATGAAGATGGTGACGAGTGTGGTAGTTTAGCAGAGTTCGGTGGTCCAGCTCTTGAAGTGCAGTACTCATTTAGTAATTTCTCATTTAAGAACTTATCTCAGCTAGCTTCTATCAATTACGATTTGGTGATCAAGAACTCCAGGGAATCAACTCAATGA 3504 0.4244 MSSNPPPPHSSHKPGKDHSAATAIPSSPSSRAKLRKIPPIPIRRSKLGNEEQEEEEDERSDSSSILLASSLGLNNIRTRSSSSPLRYSSSVGAPSFLTQNAITINDARFGSRSNSHPKKDLGGRIHFNQFKSLKDHSQLIPVLEGHHAAFAKEMQSPRFQEILRLTSGRKKRNPDIKSFSHELNSKGVRPFPIWKHRAFGHLEEVMSAIRAKFEKFKEEVDSDLGGFAGDLVGILEKNLVCDREWREKLEDLLVVAQQCAKMSPTQFWIKCESIVQNLDDKRQELPVGILKQAHTRLLFILTRCTRLVQFQKESGFEQDHILGLHQLSDLGVYPEQILKAAQQNSSIPLAGHETAEKQLKMLHSKEKEKPKTTKSKADQQVSVAIDNPEVAPVKSVESTSGSYRMSSWRKFPSAAERKRKGQDAVDTPSKGEMDHLLVKDENAENLDTSSCHPEHSQSSSRTRKVSWGFWGDQQNLTYDDSMICRICEVEIPIVHVEEHSRICTIADRCDLKGLTVNERLERVSETIERILESWTPKSTPKSTDTPGESFDLAASNVLEEFSDLSLERNNMSCRCSEDMLDSTTEPDNTFVMDDLNFSPRISCEARIFIKPDHGTKVSSAGSLTPRSPLVTPRTTQLEMLLSGRRTLSELESCDQISRLVEIARAVANVNNCDYSALEYMLDRLEDLKYAIQDRKVDALIVETFGRRIENLLQEKYISLCGQIEDEKVDSSTSVADEESSVEDDTVRSLRASPINACSKDRTTIEDFEIMQPISRGAFGRVFLAKKKITGDLFAIKVLKKADMIRKNAVQSILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSMLRNLGCLDENMARVYIAEVVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAPSFSAILEDDEPKPTHSFKREERQRQSVVGTPDYLAPEILLGMGHGVTADWWSVGVILYELLVGIPPFNAEHPQQIFDNIINRDIQWPKIPDEISFEAYDLINKLLNENPVQRLGATGATEVKRHAFFKDINWDTLARQKAMFIPSAEALDTSYFMSRYVWNPEDEHCLGVSDFDEITETCSSGSGSDMLDEDGDECGSLAEFGGPALEVQYSFSNFSFKNLSQLASINYDLVIKNSRESTQ 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00085 1167 Pfam Protein kinase domain 768 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00085 1167 MobiDBLite consensus disorder prediction 449 463 - -
Phco9g00085 1167 MobiDBLite consensus disorder prediction 407 434 - -
Phco9g00085 1167 FunFam probable serine/threonine protein kinase IREH1 765 855 - -
Phco9g00085 1167 MobiDBLite consensus disorder prediction 444 463 - -
Phco9g00085 1167 PANTHER SERINE/THREONINE-PROTEIN KINASE 447 1109 - -
Phco9g00085 1167 CDD STKc_MAST_like 773 1058 - -
Phco9g00085 1167 ProSiteProfiles AGC-kinase C-terminal domain profile. 1054 1154 IPR000961 GO:0004674|GO:0005524|GO:0006468
Phco9g00085 1167 MobiDBLite consensus disorder prediction 364 386 - -
Phco9g00085 1167 MobiDBLite consensus disorder prediction 1 64 - -
Phco9g00085 1167 SUPERFAMILY Protein kinase-like (PK-like) 764 1082 IPR011009 -
Phco9g00085 1167 MobiDBLite consensus disorder prediction 411 434 - -
Phco9g00085 1167 Gene3D Transferase(Phosphotransferase) domain 1 851 1071 - -
Phco9g00085 1167 ProSiteProfiles Protein kinase domain profile. 767 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00085 1167 SMART serkin_6 767 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00085 1167 Gene3D Phosphorylase Kinase; domain 1 765 1080 - -
Phco9g00085 1167 ProSitePatterns Serine/Threonine protein kinases active-site signature. 886 898 IPR008271 GO:0004672|GO:0006468
Phco9g00085 1167 FunFam Probable serine/threonine protein kinase IREH1 851 1071 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00085 Phco-Chr9 567829 581345 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Phco9g00085 Pkinase 1.6e-64 CL0016