Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00077 ATGGCTTCCTCTAATGGTGGTGTGCCGCCGGGATTTAGGTTTCATCCAACGGATGAAGAGCTTCTTCATTACTACTTGAAGAAGAAGGTCTCCTTTCAGAAGTTTGACATGGATGTTATTAGAGAGGTCGACTTGAACAAGATGGAACCTTGGGACTTGCAAGAAAGATGTAGAATTGGATCTACTCCACAAAACGAGTGGTATTTCTTCAGTCACAAGGATAGAAAGTACCCTACAGGTTCAAGGACTAATAGAGCAACGAATGCAGGGTTTTGGAAAGCAACAGGAAGAGACAAATGCATTAGGAACAGCTATAAGAAGATTGGAATGAGAAAAACCCTTGTGTTTTACAAAGGAAGAGCTCCTCATGGACAAAAGACTGATTGGATCATGCATGAGTACCGTCTAGAAGATGCCAATGACCCTCAAGGAAGTGCCAATGAAGATGGGTGGGTGGTGTGCAGAGTGTTCAAGAAGAAGAATTTATTCAAGATTGGAAATGAAGGTGGCATAACACACAATTCAGATCAACAAATGAACAATTCCTCAAGCACAATTGGACGCTCCTTCATGCATAGAGAAAACCATTACCTGCTACACCAACAGCAAAATCCCAGGGAGCTTGATAAGCCTGAGCTCGGTCTCCATTACCCACACTTGCAAAATCCCCAATACTCACTGTTTCAATCCCAAAGTCTTCTTCAAAGCCAAAAACCTATGGTTTATGACTATTCATATGCATCATCTCTACCTTCAGACACTCCTATAATGGCAAAGCAACTGATGACAAACCCTAGAGACTGTGAGAGTGGCAGCGAGGGACTAAGGTATCAAGTTTCGGAGTCTGGAATGGAAGTTGGATCGTGTGAGCCAAACCAAGAAATGGGTGGCGGAAGAGGTGAAGGGATAAACGAATGGGGTGTTCTTGATAGGCTAGTTACTTCTCATCTTGGAAATGAAGAGTCAAACAAAGGGGTGAGGTTTGAGGAGGCAAATCCTCAGTCTGTGCATCAGATCAACCAACTTTCGTTACGGGGAGAGATGGATTTCTGGGCCTATGGACCAAAACAATGA 1074 0.4348 MASSNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQERCRIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDANDPQGSANEDGWVVCRVFKKKNLFKIGNEGGITHNSDQQMNNSSSTIGRSFMHRENHYLLHQQQNPRELDKPELGLHYPHLQNPQYSLFQSQSLLQSQKPMVYDYSYASSLPSDTPIMAKQLMTNPRDCESGSEGLRYQVSESGMEVGSCEPNQEMGGGRGEGINEWGVLDRLVTSHLGNEESNKGVRFEEANPQSVHQINQLSLRGEMDFWAYGPKQ 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00077 357 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Phco9g00077 357 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
Phco9g00077 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 221 - -
Phco9g00077 357 Gene3D NAC domain 17 164 IPR036093 GO:0003677|GO:0006355
Phco9g00077 357 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Phco9g00077 357 FunFam NAC domain-containing protein 17 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00077 Phco-Chr9 512522 514157 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco9g00077 NAM 2.9e-37 No_clan